RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 CCDC94Q9BW85 323 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 COLEC11Q9BWP8 271 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 CDT1Q9H211 546 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 ZHX3Q9H4I2 956 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 PARVGQ9HBI0 331 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 MARCH5Q9NX47 278 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 CLEC1BQ9P126 229 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 VCANP13611 3396 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 K7ENM7 598 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 SPTLC2O15270 562 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 MBTPS2O43462 519 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 F13A1P00488 732 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 URODP06132 367 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 THP07101 528 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 MAPTP10636 758 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 YARSP54577 528 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 NCKAP1LP55160 1127 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 TUSC3Q13454 348 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 MPZL3Q6UWV2 235 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 CCDC73Q6ZRK6 1079 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 ZBTB33Q86T24 672 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 LINC00301Q8NCQ3 95 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 CASP10Q92851 521 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 BICD1Q96G01 975 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 VN1R3Q9BXE9 311 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 TOPORSQ9NS56 1045 aaPredicted RBP15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 ANKFY1Q9P2R3 1169 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 TFIP11Q9UBB9 837 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 IRAK3Q9Y616 596 aa15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 SPTBN5Q9NRC6 3674 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-205ENST00000426678 NCOR1O75376 2440 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 PTGESO14684 152 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 TOM1L1O75674 476 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 YEATS4O95619 227 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 SOD2P04179 222 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 MCF2P10911 925 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 HARSP12081 509 aaKnown RBP15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 SCP2P22307 547 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 GRM5P41594 1212 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 STAT6P42226 847 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 ZNF131P52739 623 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 RBM10P98175 930 aaKnown RBP15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 COASYQ13057 564 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 PTPN14Q15678 1187 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 FOXD4L6Q3SYB3 417 aaPredicted RBP15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 FOXD4L3Q6VB84 417 aaPredicted RBP15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 HAUS6Q7Z4H7 955 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 VN1R2Q8NFZ6 395 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 HERC2P3Q9BVR0 1158 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 PTPRHQ9HD43 1115 aa15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 MRPL17Q9NRX2 175 aaKnown RBP15.94■□□□□ 0.14
NCKIPSD-205ENST00000426678 CASTOR2A6NHX0 329 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 TRAK2O60296 914 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 CLASP2O75122 1294 aaKnown RBP15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 PPP6R2O75170 966 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 PROZP22891 400 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 MATR3P43243 847 aaKnown RBP eCLIP15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 GLUD2P49448 558 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 OSTNP61366 133 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 HSP90AA2PQ14568 343 aaPredicted RBP15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 NOLC1Q14978 699 aaKnown RBP eCLIP15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 SMAD2Q15796 467 aaKnown RBP15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 KIAA1841Q6NSI8 718 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 ZPBP2Q6X784 338 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 TMEM184AQ6ZMB5 413 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 SV2BQ7L1I2 683 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 FAM178BQ8IXR5 827 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 CEP120Q8N960 986 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 SMRP1Q8NCR6 262 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 EMILIN2Q9BXX0 1053 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 PRKAG3Q9UGI9 489 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 ADAM28Q9UKQ2 775 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 SSX2IPQ9Y2D8 614 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 HCFC2Q9Y5Z7 792 aa15.93■□□□□ 0.14
NCKIPSD-205ENST00000426678 C2CD2LO14523 706 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 HNRNPDLO14979 420 aaKnown RBP15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 BRD1O95696 1058 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 ABCD1P33897 745 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 LIG4P49917 911 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 PKP1Q13835 747 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 KCNC3Q14003 757 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 GLRA4Q5JXX5 417 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 ANKRD54Q6NXT1 300 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 FUT10Q6P4F1 479 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 PPFIBP1Q86W92 1011 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 RABGGTAQ92696 567 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 ACAP3Q96P50 834 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 CITO14578 2027 aa15.92■□□□□ 0.14
NCKIPSD-205ENST00000426678 SF3B1O75533 1304 aaKnown RBP eCLIP15.92■□□□□ 0.141e-8■■■■■ 103.4
NCKIPSD-205ENST00000426678 TRIP11Q15643 1979 aa15.91■□□□□ 0.14
NCKIPSD-205ENST00000426678 F8W810 466 aa15.91■□□□□ 0.14
NCKIPSD-205ENST00000426678 ABLIM1O14639 778 aa15.91■□□□□ 0.14
NCKIPSD-205ENST00000426678 CLDN3O15551 220 aa15.91■□□□□ 0.14
NCKIPSD-205ENST00000426678 CUTAO60888 179 aa15.91■□□□□ 0.14
NCKIPSD-205ENST00000426678 TADA2AO75478 443 aa15.91■□□□□ 0.14
NCKIPSD-205ENST00000426678 HOXB8P17481 243 aaPredicted RBP15.91■□□□□ 0.14
NCKIPSD-205ENST00000426678 TPRNQ4KMQ1 711 aa15.91■□□□□ 0.14
NCKIPSD-205ENST00000426678 ATL3Q6DD88 541 aa15.91■□□□□ 0.14
NCKIPSD-205ENST00000426678 DYMQ7RTS9 669 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms