RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 SNX12Q9UMY4 172 aa3□□□□□ -1.93
LINC00407-201ENST00000426509 L1RE1Q9UN81 338 aa3□□□□□ -1.93
LINC00407-201ENST00000426509 SCAF8Q9UPN6 1271 aaKnown RBP3□□□□□ -1.93
LINC00407-201ENST00000426509 PCDHA13Q9Y5I0 950 aa3□□□□□ -1.93
LINC00407-201ENST00000426509 PCDHA1Q9Y5I3 950 aa3□□□□□ -1.93
LINC00407-201ENST00000426509 COL4A3BPQ9Y5P4 624 aa3□□□□□ -1.93
LINC00407-201ENST00000426509 DUSP10Q9Y6W6 482 aa3□□□□□ -1.93
LINC00407-201ENST00000426509 BRCA2P51587 3418 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ASTN1O14525 1302 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ATP8B3O60423 1300 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 HTTP42858 3142 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SPTBN5Q9NRC6 3674 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 IGLV3-22A0A075B6J6 115 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 MACROD2A1Z1Q3 448 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TARSL2A2RTX5 802 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SPDYE3A6NKU9 549 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 LRRIQ3A6PVS8 624 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 RSPH10B2B2RC85 870 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 MEIS1O00470 390 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TM4SF5O14894 197 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 POLR3GO15318 223 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 MSH4O15457 936 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TREHO43280 583 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 NCK2O43639 380 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 KRT86O43790 486 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 AKR1B10O60218 316 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 N4BP1O75113 896 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TACC1O75410 805 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TNFRSF21O75509 655 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PSMD10O75832 226 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 RAD17O75943 681 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PRPF6O94906 941 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 EYA4O95677 639 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 GNA14O95837 355 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 FOSP01100 380 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SSBP05455 408 aaKnown RBP eCLIP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 P4HBP07237 508 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TUBBP07437 444 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 RSPH10BP0C881 870 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ZBTB48P10074 688 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 MYBP10242 640 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 MYBL2P10244 700 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 BMP3P12645 472 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ACPPP15309 386 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PRLRP16471 622 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PCSK2P16519 638 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ERCC3P19447 782 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 RPA1P27694 616 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 HOXA13P31271 388 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SOX18P35713 384 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 MAGEA1P43355 309 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TUBB4BP68371 445 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ITIH3Q06033 890 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 GFPT1Q06210 699 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 CKAP4Q07065 602 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 C2orf54Q08AI8 447 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 RAD51AP2Q09MP3 1159 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PABPC4Q13310 644 aaKnown RBP eCLIP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ADGRE1Q14246 886 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 DSC3Q14574 896 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SMC1AQ14683 1233 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 CASP8Q14790 479 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 EPHA7Q15375 998 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SPA17Q15506 151 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PCSK7Q16549 785 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 NFIL3Q16649 462 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 AOC3Q16853 763 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 RSPO4Q2I0M5 234 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 CCDC40Q4G0X9 1142 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PRR16Q569H4 304 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 HERC4Q5GLZ8 1057 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 FAM83BQ5T0W9 1011 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 KLHDC7AQ5VTJ3 777 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SFMBT2Q5VUG0 894 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 HAUS3Q68CZ6 603 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 MCTP2Q6DN12 878 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PDE12Q6L8Q7 609 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 NFRKBQ6P4R8 1299 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ELMSAN1Q6PJG2 1045 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 B3GNT9Q6UX72 402 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SLC30A10Q6XR72 485 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ZNF771Q7L3S4 317 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 RRAGAQ7L523 313 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 HDXQ7Z353 690 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 FBXO11Q86XK2 927 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 CATSPER3Q86XQ3 398 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 GSPT2Q8IYD1 628 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 MMGT1Q8N4V1 131 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 DEFB123Q8N688 67 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 C1orf127Q8N9H9 656 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SYT2Q8N9I0 419 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 NEK11Q8NG66 645 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ERMNQ8TAM6 284 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 CYP2W1Q8TAV3 490 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TBC1D5Q92609 795 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SLC5A5Q92911 643 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SECISBP2LQ93073 1101 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 LENG1Q96BZ8 264 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ARMC5Q96C12 935 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 BORCS6Q96GS4 357 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms