RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 SLC6A9P48067 706 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 RAB27AP51159 221 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 SCNN1GP51170 649 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 KRT85P78386 507 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 MCL1Q07820 350 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 CNGB1Q14028 1251 aaPredicted RBP4.19□□□□□ -1.74
HDAC2-202ENST00000425835 RSPH3Q86UC2 560 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 FAM83AQ86UY5 434 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 CMTR2Q8IYT2 770 aaKnown RBP4.19□□□□□ -1.74
HDAC2-202ENST00000425835 CPA6Q8N4T0 437 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.19□□□□□ -1.74
HDAC2-202ENST00000425835 JDP2Q8WYK2 163 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 HDAC10Q969S8 669 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 COA7Q96BR5 231 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 HSPBAP1Q96EW2 488 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 TMX3Q96JJ7 454 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 GPR20Q99678 358 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 LSM14BQ9BX40 385 aaKnown RBP4.19□□□□□ -1.74
HDAC2-202ENST00000425835 GPR87Q9BY21 358 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 CPEB1Q9BZB8 566 aaKnown RBP4.19□□□□□ -1.74
HDAC2-202ENST00000425835 CSRNP2Q9H175 543 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 MANSC1Q9H8J5 431 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 TMEM140Q9NV12 185 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 SIK3Q9Y2K2 1263 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 THRAP3Q9Y2W1 955 aaKnown RBP4.19□□□□□ -1.74
HDAC2-202ENST00000425835 GIT1Q9Y2X7 761 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 ACTL7AQ9Y615 435 aa4.19□□□□□ -1.74
HDAC2-202ENST00000425835 CYP27B1O15528 508 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 AKAP10O43572 662 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 GPR32O75388 356 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 ALDH1A3P47895 512 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 ADKP55263 362 aaKnown RBP4.18□□□□□ -1.74
HDAC2-202ENST00000425835 PIN1Q13526 163 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-202ENST00000425835 CDSNQ15517 529 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 NRN1LQ496H8 165 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 GJC2Q5T442 439 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-202ENST00000425835 AFMIDQ63HM1 303 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 ZNF572Q7Z3I7 529 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-202ENST00000425835 APBB1IPQ7Z5R6 666 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-202ENST00000425835 CATIPQ7Z7H3 387 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 ZGPATQ8N5A5 531 aaKnown RBP4.18□□□□□ -1.74
HDAC2-202ENST00000425835 MDGA1Q8NFP4 955 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 SLC35B2Q8TB61 432 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 SH3RF3Q8TEJ3 882 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-202ENST00000425835 TFAP2CQ92754 450 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 EDAQ92838 391 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 PHACTR3Q96KR7 559 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 CDK5RAP1Q96SZ6 601 aaKnown RBP4.18□□□□□ -1.74
HDAC2-202ENST00000425835 TDP1Q9NUW8 608 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 POGKQ9P215 609 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 ZNF180Q9UJW8 692 aa4.18□□□□□ -1.74
HDAC2-202ENST00000425835 CXorf49A8MYA2 514 aaPredicted RBP4.17□□□□□ -1.74
HDAC2-202ENST00000425835 B5MCH6 92 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 AMY1AP04745 511 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 IL2RBP14784 551 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 ALOX15P16050 662 aaPredicted RBP4.17□□□□□ -1.74
HDAC2-202ENST00000425835 ZSCAN20P17040 1043 aaPredicted RBP4.17□□□□□ -1.74
HDAC2-202ENST00000425835 DDCP20711 480 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 EDNRBP24530 442 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 ACRV1P26436 265 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 PCSK1P29120 753 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 MAN2A2P49641 1150 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 FLT3LGP49771 235 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 EPHB1P54762 984 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 PTH1RQ03431 593 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 RRP1BQ14684 758 aaKnown RBP4.17□□□□□ -1.74
HDAC2-202ENST00000425835 R3HDM1Q15032 1099 aaKnown RBP4.17□□□□□ -1.74
HDAC2-202ENST00000425835 USP39Q53GS9 565 aaKnown RBP4.17□□□□□ -1.74
HDAC2-202ENST00000425835 FAM47AQ5JRC9 791 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 TMEM240Q5SV17 173 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 OR10H5Q8NGA6 315 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 JPH3Q8WXH2 748 aaPredicted RBP4.17□□□□□ -1.74
HDAC2-202ENST00000425835 EXTL1Q92935 676 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 BORCS6Q96GS4 357 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 LRGUKQ96M69 825 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 MYOCQ99972 504 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 MRI1Q9BV20 369 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 RTFDC1Q9BY42 306 aaPredicted RBP4.17□□□□□ -1.74
HDAC2-202ENST00000425835 MOCS1Q9NZB8 636 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 ZIM2Q9NZV7 527 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 NOB1Q9ULX3 412 aaKnown RBP4.17□□□□□ -1.74
HDAC2-202ENST00000425835 TSC22D4Q9Y3Q8 395 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 IPPQ9Y573 584 aa4.17□□□□□ -1.74
HDAC2-202ENST00000425835 MYBBP1AQ9BQG0 1328 aaKnown RBP4.17□□□□□ -1.74
HDAC2-202ENST00000425835 FAM20BO75063 409 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 ABLIM3O94929 683 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 ADRB1P08588 477 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 ATP5JP18859 108 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 GUCY1A2P33402 732 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 WASP42768 502 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 RABGGTBP53611 331 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 TARDBPQ13148 414 aaKnown RBP eCLIP4.16□□□□□ -1.74
HDAC2-202ENST00000425835 SP140Q13342 867 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 LRRC41Q15345 812 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 RRP12Q5JTH9 1297 aaKnown RBP4.16□□□□□ -1.74
HDAC2-202ENST00000425835 C1QL3Q5VWW1 255 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 EFCAB12Q6NXP0 572 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 ZNF529Q6P280 563 aa4.16□□□□□ -1.74
HDAC2-202ENST00000425835 GADL1Q6ZQY3 521 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms