RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 ZMYND10O75800 440 aa19.48■□□□□ 0.71
HDAC7-208ENST00000425451 SPATA31C1P0DKV0 1188 aa19.48■□□□□ 0.71
HDAC7-208ENST00000425451 XRCC6P12956 609 aaKnown RBP eCLIP19.48■□□□□ 0.71
HDAC7-208ENST00000425451 TXKP42681 527 aa19.48■□□□□ 0.71
HDAC7-208ENST00000425451 PRSS55Q6UWB4 352 aaPredicted RBP19.48■□□□□ 0.71
HDAC7-208ENST00000425451 WASF1Q92558 559 aa19.48■□□□□ 0.71
HDAC7-208ENST00000425451 TBC1D17Q9HA65 648 aa19.48■□□□□ 0.71
HDAC7-208ENST00000425451 GPRC5CQ9NQ84 441 aa19.48■□□□□ 0.71
HDAC7-208ENST00000425451 PARP2Q9UGN5 583 aa19.48■□□□□ 0.71
HDAC7-208ENST00000425451 BTBD18B2RXH4 712 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 STK25O00506 426 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 TADA2AO75478 443 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 FOXK2Q01167 660 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 HTR4Q13639 388 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 HSP90AA2PQ14568 343 aaPredicted RBP19.47■□□□□ 0.71
HDAC7-208ENST00000425451 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 GET4Q7L5D6 327 aaPredicted RBP19.47■□□□□ 0.71
HDAC7-208ENST00000425451 NECAB1Q8N987 351 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 ST13P5Q8NFI4 369 aaPredicted RBP19.47■□□□□ 0.71
HDAC7-208ENST00000425451 CXCL16Q9H2A7 254 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 FZD8Q9H461 694 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 DLGAP2Q9P1A6 1054 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 DCHS1Q96JQ0 3298 aa19.47■□□□□ 0.71
HDAC7-208ENST00000425451 EP300Q09472 2414 aaPredicted RBP19.46■□□□□ 0.71
HDAC7-208ENST00000425451 PTGESO14684 152 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 USO1O60763 962 aaKnown RBP19.46■□□□□ 0.71
HDAC7-208ENST00000425451 LARGE1O95461 756 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 CREMQ03060 361 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 TUSC3Q13454 348 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 NAB2Q15742 525 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 PHLDB3Q6NSJ2 640 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 MAEAQ7L5Y9 396 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 CLSTN3Q9BQT9 956 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 RPP25Q9BUL9 199 aaKnown RBP19.46■□□□□ 0.71
HDAC7-208ENST00000425451 BRMS1Q9HCU9 246 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 SLC2A4RGQ9NR83 387 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 NUMBLQ9Y6R0 609 aa19.46■□□□□ 0.71
HDAC7-208ENST00000425451 POTEMA6NI47 508 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 LRRIQ4A6NIV6 560 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 NEMFO60524 1076 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 KIF4AO95239 1232 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 ME3Q16798 604 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 FAM187BQ17R55 369 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 CDCA2Q69YH5 1023 aaPredicted RBP19.45■□□□□ 0.7
HDAC7-208ENST00000425451 LNX1Q8TBB1 728 aaPredicted RBP19.45■□□□□ 0.7
HDAC7-208ENST00000425451 HASPINQ8TF76 798 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 PRIMPOLQ96LW4 560 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 TMEM60Q9H2L4 133 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 FBXW11Q9UKB1 542 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 DOCK6Q96HP0 2047 aa19.45■□□□□ 0.7
HDAC7-208ENST00000425451 SF3B1O75533 1304 aaKnown RBP eCLIP19.45■□□□□ 0.74e-6■■■■■ 139.6
HDAC7-208ENST00000425451 CASTOR2A6NHX0 329 aa19.44■□□□□ 0.7
HDAC7-208ENST00000425451 ADAM12O43184 909 aa19.44■□□□□ 0.7
HDAC7-208ENST00000425451 DCNP07585 359 aaKnown RBP19.44■□□□□ 0.7
HDAC7-208ENST00000425451 FSHRP23945 695 aa19.44■□□□□ 0.7
HDAC7-208ENST00000425451 GRASPQ7Z6J2 395 aaPredicted RBP19.44■□□□□ 0.7
HDAC7-208ENST00000425451 CATSPER3Q86XQ3 398 aa19.44■□□□□ 0.7
HDAC7-208ENST00000425451 DIS3L2Q8IYB7 885 aaKnown RBP19.44■□□□□ 0.7
HDAC7-208ENST00000425451 NSUN7Q8NE18 718 aaKnown RBP19.44■□□□□ 0.7
HDAC7-208ENST00000425451 PIK3R5Q8WYR1 880 aa19.44■□□□□ 0.7
HDAC7-208ENST00000425451 FGF14Q92915 247 aa19.44■□□□□ 0.7
HDAC7-208ENST00000425451 CCDC43Q96MW1 224 aaKnown RBP19.44■□□□□ 0.7
HDAC7-208ENST00000425451 TTPALQ9BTX7 342 aa19.44■□□□□ 0.7
HDAC7-208ENST00000425451 PDZD7Q9H5P4 517 aa19.44■□□□□ 0.7
HDAC7-208ENST00000425451 ARHGEF3Q9NR81 526 aa19.44■□□□□ 0.7
HDAC7-208ENST00000425451 PRMT7Q9NVM4 692 aaPredicted RBP19.44■□□□□ 0.7
HDAC7-208ENST00000425451 SNTG2Q9NY99 539 aa19.44■□□□□ 0.7
HDAC7-208ENST00000425451 CACNA1AO00555 2505 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 MED24O75448 989 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 EDN1P05305 212 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 IGFBP6P24592 240 aaPredicted RBP19.43■□□□□ 0.7
HDAC7-208ENST00000425451 NTHL1P78549 312 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 ANKRD1Q15327 319 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 FAM171A1Q5VUB5 890 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 BSNDQ8WZ55 320 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 GTF3C6Q969F1 213 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 USP20Q9Y2K6 914 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 SIT1Q9Y3P8 196 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 ZFP37Q9Y6Q3 630 aaPredicted RBP19.43■□□□□ 0.7
HDAC7-208ENST00000425451 R4GN57 208 aa19.43■□□□□ 0.7
HDAC7-208ENST00000425451 JAK2O60674 1132 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 HNRNPA1P09651 372 aaKnown RBP eCLIP19.42■□□□□ 0.7
HDAC7-208ENST00000425451 GLULP15104 373 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 ATP2B1P20020 1258 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 RFX1P22670 979 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 ID4P47928 161 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 ANAPC15P60006 121 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 GPC5P78333 572 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 PSMD5Q16401 504 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 SPECC1Q5M775 1068 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 DCLRE1AQ6PJP8 1040 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 PARM1Q6UWI2 310 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 CEP57Q86XR8 500 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 MCPH1Q8NEM0 835 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 CCDC113Q9H0I3 377 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 SEMA4AQ9H3S1 761 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 TUFT1Q9NNX1 390 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 CDH7Q9ULB5 785 aa19.42■□□□□ 0.7
HDAC7-208ENST00000425451 N4BP3O15049 544 aa19.41■□□□□ 0.7
HDAC7-208ENST00000425451 RECQL4O94761 1208 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms