RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 KANK3Q6NY19 840 aa23.69■■□□□ 1.38
CDCP1-202ENST00000425231 CABP7Q86V35 215 aa23.69■■□□□ 1.38
CDCP1-202ENST00000425231 ACO2Q99798 780 aaKnown RBP23.69■■□□□ 1.38
CDCP1-202ENST00000425231 PTPRHQ9HD43 1115 aa23.69■■□□□ 1.38
CDCP1-202ENST00000425231 KMT5AQ9NQR1 393 aa23.69■■□□□ 1.38
CDCP1-202ENST00000425231 DZANK1Q9NVP4 752 aa23.69■■□□□ 1.38
CDCP1-202ENST00000425231 RBM19Q9Y4C8 960 aaKnown RBP23.69■■□□□ 1.38
CDCP1-202ENST00000425231 VPS37CA5D8V6 355 aaPredicted RBP23.68■■□□□ 1.38
CDCP1-202ENST00000425231 BMP15O95972 392 aa23.68■■□□□ 1.38
CDCP1-202ENST00000425231 PDCP20941 246 aa23.68■■□□□ 1.38
CDCP1-202ENST00000425231 DSG1Q02413 1049 aa23.68■■□□□ 1.38
CDCP1-202ENST00000425231 GRIN1Q05586 938 aa23.68■■□□□ 1.38
CDCP1-202ENST00000425231 SF3A1Q15459 793 aaKnown RBP23.68■■□□□ 1.38
CDCP1-202ENST00000425231 ADAM28Q9UKQ2 775 aa23.68■■□□□ 1.38
CDCP1-202ENST00000425231 SSX2IPQ9Y2D8 614 aa23.68■■□□□ 1.38
CDCP1-202ENST00000425231 GDAQ9Y2T3 454 aa23.68■■□□□ 1.38
CDCP1-202ENST00000425231 PRR33A8MZF0 331 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 SLC26A4O43511 780 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 THP07101 528 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 PLA2G4BP0C869 781 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 GLUD2P49448 558 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 RAD51AP2Q09MP3 1159 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 RARS2Q5T160 578 aaKnown RBP23.67■■□□□ 1.38
CDCP1-202ENST00000425231 FUT10Q6P4F1 479 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 FEZF2Q8TBJ5 459 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 LRRC15Q8TF66 581 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 CDK5RAP3Q96JB5 506 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 POMKQ9H5K3 350 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 RXFP1Q9HBX9 757 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 KCND2Q9NZV8 630 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 SLC16A4O15374 487 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 TEX28O15482 410 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 WEE2P0C1S8 567 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 PLS3P13797 630 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 SYT1P21579 422 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 HSP90AA2PQ14568 343 aaPredicted RBP23.67■■□□□ 1.38
CDCP1-202ENST00000425231 ARSHQ5FYA8 562 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 SPIRE2Q8WWL2 714 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 INTS4Q96HW7 963 aaKnown RBP23.67■■□□□ 1.38
CDCP1-202ENST00000425231 B3GALT6Q96L58 329 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 FBXL18Q96ME1 805 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 NECTIN4Q96NY8 510 aa23.67■■□□□ 1.38
CDCP1-202ENST00000425231 TARS2Q9BW92 718 aaKnown RBP23.67■■□□□ 1.38
CDCP1-202ENST00000425231 MRPL4Q9BYD3 311 aaKnown RBP23.67■■□□□ 1.38
CDCP1-202ENST00000425231 CASTOR2A6NHX0 329 aa23.66■■□□□ 1.38
CDCP1-202ENST00000425231 LONP1P36776 959 aaKnown RBP23.66■■□□□ 1.38
CDCP1-202ENST00000425231 UBA7P41226 1012 aa23.66■■□□□ 1.38
CDCP1-202ENST00000425231 GPR65Q8IYL9 337 aa23.66■■□□□ 1.38
CDCP1-202ENST00000425231 CEP120Q8N960 986 aa23.66■■□□□ 1.38
CDCP1-202ENST00000425231 CDT1Q9H211 546 aa23.66■■□□□ 1.38
CDCP1-202ENST00000425231 MYH11P35749 1972 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 NPHP3-ACAD11A0A0J9YXS1 232 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 ABLIM1O14639 778 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 TADA2AO75478 443 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 PROZP22891 400 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 MTHFRP42898 656 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 USP41Q3LFD5 358 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 KIAA1841Q6NSI8 718 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 APBB1IPQ7Z5R6 666 aaPredicted RBP23.65■■□□□ 1.38
CDCP1-202ENST00000425231 TMEM161BQ8NDZ6 487 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 RIPOR3Q96MK2 946 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 BLOC1S4Q9NUP1 217 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 KCNG1Q9UIX4 513 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 CLIC4Q9Y696 253 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 TRIP11Q15643 1979 aa23.65■■□□□ 1.38
CDCP1-202ENST00000425231 KIF4AO95239 1232 aa23.64■■□□□ 1.37
CDCP1-202ENST00000425231 ADH1AP07327 375 aa23.64■■□□□ 1.37
CDCP1-202ENST00000425231 GRM5P41594 1212 aa23.64■■□□□ 1.37
CDCP1-202ENST00000425231 RESTQ13127 1097 aa23.64■■□□□ 1.37
CDCP1-202ENST00000425231 PTPAQ15257 358 aa23.64■■□□□ 1.37
CDCP1-202ENST00000425231 ATAT1Q5SQI0 421 aa23.64■■□□□ 1.37
CDCP1-202ENST00000425231 TMC5Q6UXY8 1006 aa23.64■■□□□ 1.37
CDCP1-202ENST00000425231 EDAQ92838 391 aa23.64■■□□□ 1.37
CDCP1-202ENST00000425231 CALML4Q96GE6 196 aa23.64■■□□□ 1.37
CDCP1-202ENST00000425231 PPP1R10Q96QC0 940 aaKnown RBP23.64■■□□□ 1.37
CDCP1-202ENST00000425231 SFXN1Q9H9B4 322 aa23.64■■□□□ 1.37
CDCP1-202ENST00000425231 PLXNA3P51805 1871 aa23.63■■□□□ 1.37
CDCP1-202ENST00000425231 SP100P23497 879 aaPredicted RBP23.63■■□□□ 1.37
CDCP1-202ENST00000425231 CACNB1Q02641 598 aaPredicted RBP23.63■■□□□ 1.37
CDCP1-202ENST00000425231 ZNF568Q3ZCX4 644 aa23.63■■□□□ 1.37
CDCP1-202ENST00000425231 ALKAL1Q6UXT8 129 aa23.63■■□□□ 1.37
CDCP1-202ENST00000425231 GPR149Q86SP6 731 aa23.63■■□□□ 1.37
CDCP1-202ENST00000425231 HASPINQ8TF76 798 aa23.63■■□□□ 1.37
CDCP1-202ENST00000425231 SF3B1O75533 1304 aaKnown RBP eCLIP23.63■■□□□ 1.37
CDCP1-202ENST00000425231 K7ELQ4 463 aaPredicted RBP23.62■■□□□ 1.37
CDCP1-202ENST00000425231 BRD1O95696 1058 aa23.62■■□□□ 1.37
CDCP1-202ENST00000425231 MAPTP10636 758 aaKnown RBP23.62■■□□□ 1.37
CDCP1-202ENST00000425231 SMTNP53814 917 aa23.62■■□□□ 1.37
CDCP1-202ENST00000425231 KARSQ15046 597 aaKnown RBP23.62■■□□□ 1.37
CDCP1-202ENST00000425231 XKR4Q5GH76 650 aa23.62■■□□□ 1.37
CDCP1-202ENST00000425231 GLRA4Q5JXX5 417 aa23.62■■□□□ 1.37
CDCP1-202ENST00000425231 FAM173BQ6P4H8 233 aa23.62■■□□□ 1.37
CDCP1-202ENST00000425231 ZBTB33Q86T24 672 aa23.62■■□□□ 1.37
CDCP1-202ENST00000425231 RIN2Q8WYP3 895 aaPredicted RBP23.62■■□□□ 1.37
CDCP1-202ENST00000425231 ZBTB45Q96K62 511 aaPredicted RBP23.62■■□□□ 1.37
CDCP1-202ENST00000425231 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.62■■□□□ 1.37
CDCP1-202ENST00000425231 FNIP2Q9P278 1114 aa23.62■■□□□ 1.37
CDCP1-202ENST00000425231 MCF2P10911 925 aa23.61■■□□□ 1.37
CDCP1-202ENST00000425231 PLCG1P19174 1290 aa23.61■■□□□ 1.37
CDCP1-202ENST00000425231 IGFBP6P24592 240 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms