RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SOX9P48436 509 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 DHPSP49366 369 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-203ENST00000424270 DNM2P50570 870 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 PON2Q15165 354 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 UBE2SQ16763 222 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 FAM78AQ5JUQ0 283 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 FUT10Q6P4F1 479 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 LILRA6Q6PI73 481 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 SIRT2Q8IXJ6 389 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 ZNF687Q8N1G0 1237 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 PIGKQ92643 395 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 MTMR8Q96EF0 704 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 MSANTD3Q96H12 275 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 ZC3H10Q96K80 434 aaKnown RBP7.12□□□□□ -1.27
SDCBP-203ENST00000424270 CORO1BQ9BR76 489 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 C8orf33Q9H7E9 229 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-203ENST00000424270 HELLSQ9NRZ9 838 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 C2orf42Q9NWW7 574 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 DNMT3BQ9UBC3 853 aaKnown RBP7.12□□□□□ -1.27
SDCBP-203ENST00000424270 FBXW11Q9UKB1 542 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 INVSQ9Y283 1065 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 DOCK8Q8NF50 2099 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 SF3B1O75533 1304 aaKnown RBP eCLIP7.11□□□□□ -1.271e-6■■■■■ 66.8
SDCBP-203ENST00000424270 ERICH2A1L162 156 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 ZBTB42B2RXF5 422 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 F8W810 466 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 SPECC1L-ADORA2AF8WAN1 911 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 PIK3CDO00329 1044 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 CDX4O14627 284 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-203ENST00000424270 MEIS2O14770 477 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 ATXN7O15265 892 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-203ENST00000424270 NTRK1P04629 796 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 PSAPP07602 524 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 PTPN2P17706 415 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 HOXA9P31269 272 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 ELF1P32519 619 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 MLH1P40692 756 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 AFF1P51825 1210 aaKnown RBP7.11□□□□□ -1.27
SDCBP-203ENST00000424270 MFAP1P55081 439 aaKnown RBP7.11□□□□□ -1.27
SDCBP-203ENST00000424270 IRX4P78413 519 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 PSMD5Q16401 504 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 MCMDC2Q4G0Z9 681 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 TRIM61Q5EBN2 209 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 CYP4A22Q5TCH4 519 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 PDZD4Q76G19 769 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-203ENST00000424270 HAUS6Q7Z4H7 955 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 ZNF843Q8N446 348 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 DEPDC1BQ8WUY9 529 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 RABGGTAQ92696 567 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 FAM167AQ96KS9 214 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 NLRP4Q96MN2 994 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 HHIPQ96QV1 700 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 MXRA8Q9BRK3 442 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 KRT23Q9C075 422 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 DUSP15Q9H1R2 295 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-203ENST00000424270 CHMP4BQ9H444 224 aaKnown RBP7.11□□□□□ -1.27
SDCBP-203ENST00000424270 RIOX1Q9H6W3 641 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 AGO4Q9HCK5 861 aaKnown RBP7.11□□□□□ -1.27
SDCBP-203ENST00000424270 UBN1Q9NPG3 1134 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 NRBP2Q9NSY0 501 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 ZSWIM5Q9P217 1185 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 GABBR1Q9UBS5 961 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 ADAM28Q9UKQ2 775 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 PCDHA6Q9UN73 950 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 PCDHA8Q9Y5H6 950 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 TICRRQ7Z2Z1 1910 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 BPTFQ12830 3046 aa7.11□□□□□ -1.27
SDCBP-203ENST00000424270 TTC41PQ6P2S7 1318 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 A0A087WZ62 844 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 CCDC163A0A0D9SF12 145 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 DPYSL4O14531 572 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 PRRG1O14668 218 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 ZNF197O14709 1029 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 SNPHO15079 494 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 CCNE2O96020 404 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 CFIP05156 583 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 MS4A1P11836 297 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 VIPR2P41587 438 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 NT5C2P49902 561 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 SCNN1GP51170 649 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 DGKEP52429 567 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 CDC42EP1Q00587 391 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 CFHR1Q03591 330 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 ITGB3BPQ13352 177 aaPredicted RBP7.1□□□□□ -1.27
SDCBP-203ENST00000424270 GRM4Q14833 912 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 SLC5A9Q2M3M2 681 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 UVSSAQ2YD98 709 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 FAM171A1Q5VUB5 890 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 VITQ6UXI7 678 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 ABHD15Q6UXT9 468 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 AGMOQ6ZNB7 445 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 TTC30AQ86WT1 665 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 RALGPS2Q86X27 583 aaPredicted RBP7.1□□□□□ -1.27
SDCBP-203ENST00000424270 RHPN2Q8IUC4 686 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 MAP4K3Q8IVH8 894 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 COLGALT2Q8IYK4 626 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 TMEFF1Q8IYR6 380 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 HACE1Q8IYU2 909 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 ELMOD1Q8N336 334 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 SYNPOQ8N3V7 929 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms