RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 SPDYE3A6NKU9 549 aa13.44□□□□□ -0.26
UFD1-203ENST00000421968 ZNF263O14978 683 aa13.44□□□□□ -0.26
UFD1-203ENST00000421968 ATXN7O15265 892 aaPredicted RBP13.44□□□□□ -0.26
UFD1-203ENST00000421968 NR1I2O75469 434 aa13.44□□□□□ -0.26
UFD1-203ENST00000421968 KPNA1P52294 538 aaPredicted RBP13.44□□□□□ -0.26
UFD1-203ENST00000421968 GRM4Q14833 912 aa13.44□□□□□ -0.26
UFD1-203ENST00000421968 MCMDC2Q4G0Z9 681 aa13.44□□□□□ -0.26
UFD1-203ENST00000421968 FAM78AQ5JUQ0 283 aa13.44□□□□□ -0.26
UFD1-203ENST00000421968 RAB44Q7Z6P3 723 aaPredicted RBP13.44□□□□□ -0.26
UFD1-203ENST00000421968 CSGALNACT1Q8TDX6 532 aa13.44□□□□□ -0.26
UFD1-203ENST00000421968 MSANTD3Q96H12 275 aa13.44□□□□□ -0.26
UFD1-203ENST00000421968 APOL6Q9BWW8 343 aa13.44□□□□□ -0.26
UFD1-203ENST00000421968 AGO4Q9HCK5 861 aaKnown RBP13.44□□□□□ -0.26
UFD1-203ENST00000421968 ATG2BQ96BY7 2078 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 SLC38A8A6NNN8 435 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 PATE3B3GLJ2 98 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 RHOP08100 348 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 POU2F2P09086 479 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 SOX9P48436 509 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 MLLT6P55198 1093 aaPredicted RBP13.43□□□□□ -0.26
UFD1-203ENST00000421968 IRX4P78413 519 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 UBE2SQ16763 222 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 ZNF423Q2M1K9 1284 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 AXDND1Q5T1B0 1012 aaPredicted RBP13.43□□□□□ -0.26
UFD1-203ENST00000421968 VITQ6UXI7 678 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 FAM200AQ8TCP9 573 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 FAM227BQ96M60 508 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 PSTPIP2Q9H939 334 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 LY9Q9HBG7 655 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 PCDHA6Q9UN73 950 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 SLC8A2Q9UPR5 921 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 PCDHB15Q9Y5E8 787 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 PCDHA8Q9Y5H6 950 aa13.43□□□□□ -0.26
UFD1-203ENST00000421968 A0A0D9SFI3 127 aa13.42□□□□□ -0.26
UFD1-203ENST00000421968 NRG2O14511 850 aaPredicted RBP13.42□□□□□ -0.26
UFD1-203ENST00000421968 DCLK1O15075 740 aa13.42□□□□□ -0.26
UFD1-203ENST00000421968 TXNDC11Q6PKC3 985 aa13.42□□□□□ -0.26
UFD1-203ENST00000421968 CATSPER4Q7RTX7 472 aa13.42□□□□□ -0.26
UFD1-203ENST00000421968 MRPL10Q7Z7H8 261 aaKnown RBP13.42□□□□□ -0.26
UFD1-203ENST00000421968 ZNF589Q86UQ0 364 aaPredicted RBP13.42□□□□□ -0.26
UFD1-203ENST00000421968 SYNPOQ8N3V7 929 aa13.42□□□□□ -0.26
UFD1-203ENST00000421968 DEPDC1BQ8WUY9 529 aa13.42□□□□□ -0.26
UFD1-203ENST00000421968 CLSTN3Q9BQT9 956 aa13.42□□□□□ -0.26
UFD1-203ENST00000421968 C8orf33Q9H7E9 229 aaPredicted RBP13.42□□□□□ -0.26
UFD1-203ENST00000421968 TEX15Q9BXT5 2789 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 A0A087WZ62 844 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 MEFVO15553 781 aaPredicted RBP13.41□□□□□ -0.26
UFD1-203ENST00000421968 GBP1P32455 592 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 MAPK8P45983 427 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 DSC1Q08554 894 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 UVSSAQ2YD98 709 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 RTP2Q5QGT7 225 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 CCNI2Q6ZMN8 369 aaPredicted RBP13.41□□□□□ -0.26
UFD1-203ENST00000421968 PIP4P1Q86T03 277 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 ASB16Q96NS5 453 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 FDXACB1Q9BRP7 624 aaPredicted RBP13.41□□□□□ -0.26
UFD1-203ENST00000421968 INO80BQ9C086 356 aaPredicted RBP13.41□□□□□ -0.26
UFD1-203ENST00000421968 MAFBQ9Y5Q3 323 aaPredicted RBP13.41□□□□□ -0.26
UFD1-203ENST00000421968 GON4LQ3T8J9 2241 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 PLXNB3Q9ULL4 1909 aa13.41□□□□□ -0.26
UFD1-203ENST00000421968 THADAQ6YHU6 1953 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 MYO9AB2RTY4 2548 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 SPECC1L-ADORA2AF8WAN1 911 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 ZNF862O60290 1169 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 VIPR2P41587 438 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 FAM193AP78312 1265 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 CCINQ13939 588 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 KARSQ15046 597 aaKnown RBP13.4□□□□□ -0.26
UFD1-203ENST00000421968 PON2Q15165 354 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 SEC23AQ15436 765 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 CEP55Q53EZ4 464 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 PKN3Q6P5Z2 889 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
UFD1-203ENST00000421968 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
UFD1-203ENST00000421968 SPTAN1Q13813 2472 aaKnown RBP13.4□□□□□ -0.26
UFD1-203ENST00000421968 TDRD15B5MCY1 1934 aaKnown RBP13.39□□□□□ -0.27
UFD1-203ENST00000421968 PI4KAP42356 2102 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 CCDC194A0A1B0GVG4 234 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 ARNTLO00327 626 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 ADAM12O43184 909 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 CTHP32929 405 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 CDC42EP1Q00587 391 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 KCNC4Q03721 635 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 SRSF1Q07955 248 aaKnown RBP eCLIP13.39□□□□□ -0.27
UFD1-203ENST00000421968 LMAN2Q12907 356 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 DRP2Q13474 957 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 PSMD5Q16401 504 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 CYP2U1Q7Z449 544 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 CEP57Q86XR8 500 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 YAF2Q8IY57 180 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 RABGGTAQ92696 567 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 SMARCD2Q92925 531 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 TCEAL4Q96EI5 215 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 FAM167AQ96KS9 214 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 GAD1Q99259 594 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 KRT23Q9C075 422 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 UBN1Q9NPG3 1134 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 AVENQ9NQS1 362 aaPredicted RBP13.39□□□□□ -0.27
UFD1-203ENST00000421968 GABBR1Q9UBS5 961 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 SEC63Q9UGP8 760 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms