RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 EIF3EP60228 445 aaKnown RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 UBE3AQ05086 875 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 LBRQ14739 615 aaKnown RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 TEX12Q9BXU0 123 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 SARS2Q9NP81 518 aaKnown RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 OLFML3Q9NRN5 406 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 PI4KBQ9UBF8 816 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 NEU2Q9Y3R4 380 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 PPEF1O14829 653 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 AIM2O14862 343 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 ANGPT2O15123 496 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 SERPINI2O75830 405 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 GYPCP04921 128 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 S100A5P33763 92 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 GALCP54803 685 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 C16orf89Q6UX73 402 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 KDM7AQ6ZMT4 941 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 ZNF507Q8TCN5 953 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 SPATA17Q96L03 361 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 DHX36Q9H2U1 1008 aaKnown RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 PDP2Q9P2J9 529 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 ADGBQ8N7X0 1667 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 DENND3A2RUS2 1198 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 C16orf96A6NNT2 1141 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 POTEAQ6S8J7 498 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 JAMLQ86YT9 394 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 TAGAPQ8N103 731 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 NSL1Q96IY1 281 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 NR1H4Q96RI1 486 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 ROPN1BQ9BZX4 212 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 ROPN1Q9HAT0 212 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 ATP6V0A4Q9HBG4 840 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 BARHL2Q9NY43 387 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 ZSCAN9O15535 394 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 TCN1P20061 433 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 SLC1A1P43005 524 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 CPA2P48052 419 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 KYNUQ16719 465 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 LVRNQ6Q4G3 990 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 PRPF39Q86UA1 669 aaKnown RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 NUP93Q8N1F7 819 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 MRPL1Q9BYD6 325 aaKnown RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 RUBCNLQ9H714 662 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 ZFATQ9P243 1243 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 LOC102724428A0A0B4J2F2 783 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 H7C1W4 665 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 ACADSP16219 412 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 SIK1P57059 783 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 LRRC34Q8IZ02 419 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 ADSSL1Q8N142 457 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 JAK3P52333 1124 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 CDH6P55285 790 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 DMC1Q14565 340 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 TEX2Q8IWB9 1127 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 CLEC4FQ8N1N0 589 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 PRPF38AQ8NAV1 312 aaKnown RBP13.03□□□□□ -0.32
CLCN4-203ENST00000421085 C20orf96Q9NUD7 363 aaPredicted RBP13.03□□□□□ -0.32
CLCN4-203ENST00000421085 NQO1P15559 274 aaKnown RBP13.03□□□□□ -0.32
CLCN4-203ENST00000421085 HSD17B3P37058 310 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 DSG1Q02413 1049 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 CNBD2Q96M20 576 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 VCPKMTQ9H867 229 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 GIMAP4Q9NUV9 329 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 TFR2Q9UP52 801 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 ZBTB24O43167 697 aaPredicted RBP13.03□□□□□ -0.32
CLCN4-203ENST00000421085 BNIP3LO60238 219 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 KLHL2O95198 593 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 PYGLP06737 847 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 ORC2Q13416 577 aaPredicted RBP13.03□□□□□ -0.32
CLCN4-203ENST00000421085 USP38Q8NB14 1042 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 TDP2O95551 362 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 SCTRP47872 440 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 MAP3K10Q02779 954 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 MYCBPAPQ8TBZ2 947 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 FAM20AQ96MK3 541 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 MAGEB5Q9BZ81 275 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLCN4-203ENST00000421085 SUGT1Q9Y2Z0 365 aa13.03□□□□□ -0.32
CLCN4-203ENST00000421085 NPHP3-ACAD11A0A0J9YXS1 232 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 ATP9BO43861 1147 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 H2AFXP16104 143 aaPredicted RBP13.02□□□□□ -0.32
CLCN4-203ENST00000421085 KCNA2P16389 499 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 MTMR1Q13613 665 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 NAIF1Q69YI7 327 aaPredicted RBP13.02□□□□□ -0.32
CLCN4-203ENST00000421085 STOX1Q6ZVD7 989 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 REXO1L1PQ8IX06 675 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 KIRREL3Q8IZU9 778 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 DHX35Q9H5Z1 703 aaKnown RBP13.02□□□□□ -0.32
CLCN4-203ENST00000421085 TUBE1Q9UJT0 475 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 ANXA13P27216 316 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 GPC3P51654 580 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 SLC29A2Q14542 456 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 GRM4Q14833 912 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 RCN1Q15293 331 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 TSGA10IPQ3SY00 556 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 CMTM5Q96DZ9 223 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 BEGAINQ9BUH8 593 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms