RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 PIGOQ8TEQ8 1089 aa18.69■□□□□ 0.58
UPF3AP3-201ENST00000420996 RABGGTAQ92696 567 aa18.69■□□□□ 0.58
UPF3AP3-201ENST00000420996 ZFP37Q9Y6Q3 630 aaPredicted RBP18.69■□□□□ 0.58
UPF3AP3-201ENST00000420996 DOCK6Q96HP0 2047 aa18.69■□□□□ 0.58
UPF3AP3-201ENST00000420996 SF3B1O75533 1304 aaKnown RBP eCLIP18.69■□□□□ 0.58
UPF3AP3-201ENST00000420996 FDPSP14324 419 aaKnown RBP18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 TXKP42681 527 aa18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 TUSC3Q13454 348 aa18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 HTR4Q13639 388 aa18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 HSP90AA2PQ14568 343 aaPredicted RBP18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 POTEGQ6S5H5 508 aa18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 PRSS55Q6UWB4 352 aaPredicted RBP18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 PPP4R3CPQ6ZMV5 832 aa18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 ERMP1Q7Z2K6 904 aa18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 PRIMPOLQ96LW4 560 aa18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 SLC2A4RGQ9NR83 387 aa18.68■□□□□ 0.58
UPF3AP3-201ENST00000420996 A0A087WWV3 80 aa18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 LRRIQ4A6NIV6 560 aa18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 USO1O60763 962 aaKnown RBP18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 ID4P47928 161 aa18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 ANKRD1Q15327 319 aa18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 RTP2Q5QGT7 225 aa18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 MTMR9Q96QG7 549 aa18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 ARHGEF3Q9NR81 526 aa18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 PRMT7Q9NVM4 692 aaPredicted RBP18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 FBXW11Q9UKB1 542 aa18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 SIT1Q9Y3P8 196 aa18.67■□□□□ 0.58
UPF3AP3-201ENST00000420996 NEMFO60524 1076 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 LMNAP02545 664 aaKnown RBP18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 HNRNPA1P09651 372 aaKnown RBP eCLIP18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 FSHRP23945 695 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 FAM187BQ17R55 369 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 CDCA2Q69YH5 1023 aaPredicted RBP18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 DCLRE1AQ6PJP8 1040 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 MCPH1Q8NEM0 835 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 KCNG4Q8TDN1 519 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 PIK3R5Q8WYR1 880 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 CLSTN3Q9BQT9 956 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 PAAF1Q9BRP4 392 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 TTPALQ9BTX7 342 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 FZD8Q9H461 694 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 GPRC5CQ9NQ84 441 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 DLGAP2Q9P1A6 1054 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 CACNG4Q9UBN1 327 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 NUMBLQ9Y6R0 609 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 MYH15Q9Y2K3 1946 aa18.66■□□□□ 0.58
UPF3AP3-201ENST00000420996 BTBD18B2RXH4 712 aa18.65■□□□□ 0.58
UPF3AP3-201ENST00000420996 WNT7AO00755 349 aa18.65■□□□□ 0.58
UPF3AP3-201ENST00000420996 DCNP07585 359 aaKnown RBP18.65■□□□□ 0.58
UPF3AP3-201ENST00000420996 SPATA31C1P0DKV0 1188 aa18.65■□□□□ 0.58
UPF3AP3-201ENST00000420996 FAM171A1Q5VUB5 890 aa18.65■□□□□ 0.58
UPF3AP3-201ENST00000420996 MAEAQ7L5Y9 396 aa18.65■□□□□ 0.58
UPF3AP3-201ENST00000420996 GRASPQ7Z6J2 395 aaPredicted RBP18.65■□□□□ 0.58
UPF3AP3-201ENST00000420996 ZBTB8OSQ8IWT0 167 aa18.65■□□□□ 0.58
UPF3AP3-201ENST00000420996 LNX1Q8TBB1 728 aaPredicted RBP18.65■□□□□ 0.58
UPF3AP3-201ENST00000420996 FANCMQ8IYD8 2048 aa18.64■□□□□ 0.58
UPF3AP3-201ENST00000420996 CASTOR2A6NHX0 329 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 PTGESO14684 152 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 N4BP3O15049 544 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 KIF4AO95239 1232 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 THP07101 528 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 ATP2B1P20020 1258 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 HOXA9P31269 272 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 ELAVL2Q12926 359 aaKnown RBP18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 PSMD5Q16401 504 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 SPECC1Q5M775 1068 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 PPM1LQ5SGD2 360 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 LIN9Q5TKA1 542 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 PDXDC1Q6P996 788 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 CEP57Q86XR8 500 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 NECAB1Q8N987 351 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 HASPINQ8TF76 798 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 SHDQ96IW2 340 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 C2orf40Q9H1Z8 148 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 PDZD7Q9H5P4 517 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 TUFT1Q9NNX1 390 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 CDH7Q9ULB5 785 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 R4GN57 208 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 DMDP11532 3685 aa18.64■□□□□ 0.57
UPF3AP3-201ENST00000420996 VWA8A3KMH1 1905 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 POTEMA6NI47 508 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 TTLL13PA6NNM8 815 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 STARD6P59095 220 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 ANAPC15P60006 121 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 GPC5P78333 572 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 NAB2Q15742 525 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 PARM1Q6UWI2 310 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 CATSPER3Q86XQ3 398 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 C1orf210Q8IVY1 113 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 DIS3L2Q8IYB7 885 aaKnown RBP18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 ST13P5Q8NFI4 369 aaPredicted RBP18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 FGF14Q92915 247 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 NACC1Q96RE7 527 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 RPP25Q9BUL9 199 aaKnown RBP18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 SNTG2Q9NY99 539 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 GVINP1Q7Z2Y8 2422 aa18.63■□□□□ 0.57
UPF3AP3-201ENST00000420996 MIA3Q5JRA6 1907 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 XYLBO75191 536 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 RECQL4O94761 1208 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 C8AP07357 584 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms