RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SHC3Q92529 594 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 SEMA4DQ92854 862 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 CGRRF1Q99675 332 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 PRMT7Q9NVM4 692 aaPredicted RBP18.14■□□□□ 0.49
SSBP3-205ENST00000417664 TSKSQ9UJT2 592 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 RRN3P2A6NIE6 340 aa18.13■□□□□ 0.49
SSBP3-205ENST00000417664 A6NJR5 290 aa18.13■□□□□ 0.49
SSBP3-205ENST00000417664 DDX3XO00571 662 aaKnown RBP eCLIP18.13■□□□□ 0.49
SSBP3-205ENST00000417664 C4BPAP04003 597 aaKnown RBP18.13■□□□□ 0.49
SSBP3-205ENST00000417664 PROZP22891 400 aa18.13■□□□□ 0.49
SSBP3-205ENST00000417664 CLCN3P51790 818 aa18.13■□□□□ 0.49
SSBP3-205ENST00000417664 POU5F1Q01860 360 aaKnown RBP18.13■□□□□ 0.49
SSBP3-205ENST00000417664 BRSK2Q8IWQ3 736 aa18.13■□□□□ 0.49
SSBP3-205ENST00000417664 PPM1KQ8N3J5 372 aa18.13■□□□□ 0.49
SSBP3-205ENST00000417664 HELQQ8TDG4 1101 aa18.13■□□□□ 0.49
SSBP3-205ENST00000417664 NLRP4Q96MN2 994 aa18.13■□□□□ 0.49
SSBP3-205ENST00000417664 TCHPQ9BT92 498 aa18.13■□□□□ 0.49
SSBP3-205ENST00000417664 Q9Y3F1 56 aa18.13■□□□□ 0.49
SSBP3-205ENST00000417664 FAM155AB1AL88 458 aaPredicted RBP18.12■□□□□ 0.49
SSBP3-205ENST00000417664 MOCS3O95396 460 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 EDN1P05305 212 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 H2AFZP0C0S5 128 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 TM4SF4P48230 202 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 CDC42EP1Q00587 391 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 PRPF4BQ13523 1007 aaKnown RBP18.12■□□□□ 0.49
SSBP3-205ENST00000417664 WDR44Q5JSH3 913 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 MTHFD1LQ6UB35 978 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 MPZL3Q6UWV2 235 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 H2AFVQ71UI9 128 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 TSC1Q92574 1164 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 APBA2Q99767 749 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 PDE11AQ9HCR9 933 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 TOPORSQ9NS56 1045 aaPredicted RBP18.12■□□□□ 0.49
SSBP3-205ENST00000417664 GNEQ9Y223 722 aaKnown RBP18.12■□□□□ 0.49
SSBP3-205ENST00000417664 PCDHGC5Q9Y5F6 944 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 CAPN6Q9Y6Q1 641 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 INO80B-WBP1J3KQ70 363 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 FAM189A1O60320 539 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 ATP1A1P05023 1023 aaKnown RBP18.12■□□□□ 0.49
SSBP3-205ENST00000417664 ZNF286BP0CG31 522 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 PNMA6AP0CW24 399 aaPredicted RBP18.12■□□□□ 0.49
SSBP3-205ENST00000417664 TNFAIP3P21580 790 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 MBTD1Q05BQ5 628 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 PPFIA1Q13136 1202 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 ATF7IP2Q5U623 682 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 ZNF516Q92618 1163 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 RPGRIP1Q96KN7 1286 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 CALR3Q96L12 384 aaKnown RBP18.12■□□□□ 0.49
SSBP3-205ENST00000417664 MAP7D2Q96T17 732 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 INO80BQ9C086 356 aaPredicted RBP18.12■□□□□ 0.49
SSBP3-205ENST00000417664 PTPRHQ9HD43 1115 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 C1orf112Q9NSG2 853 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 TNFSF13BQ9Y275 285 aa18.12■□□□□ 0.49
SSBP3-205ENST00000417664 CNTNAP2Q9UHC6 1331 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 ABLIM1O14639 778 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 LRRN2O75325 713 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 ZNF865P0CJ78 1059 aaPredicted RBP18.11■□□□□ 0.49
SSBP3-205ENST00000417664 NAP1L1P55209 391 aaKnown RBP18.11■□□□□ 0.49
SSBP3-205ENST00000417664 CHMP4BP1P59074 171 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 IGBP1P78318 339 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 GRIK4Q16099 956 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 WDR49Q8IV35 697 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 DHX38Q92620 1227 aaKnown RBP18.11■□□□□ 0.49
SSBP3-205ENST00000417664 GOLGA1Q92805 767 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 KREMEN1Q96MU8 473 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 AGPAT1Q99943 283 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 SALL4Q9UJQ4 1053 aa18.11■□□□□ 0.49
SSBP3-205ENST00000417664 ENC1O14682 589 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 ZEB2O60315 1214 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 IGHA2P01877 340 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 TCP1P17987 556 aaKnown RBP18.1■□□□□ 0.49
SSBP3-205ENST00000417664 CKAP4Q07065 602 aaKnown RBP18.1■□□□□ 0.49
SSBP3-205ENST00000417664 KYAT1Q16773 422 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 RSRC2Q7L4I2 434 aaKnown RBP18.1■□□□□ 0.49
SSBP3-205ENST00000417664 ZNF410Q86VK4 478 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 GLYCTKQ8IVS8 523 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 LNX1Q8TBB1 728 aaPredicted RBP18.1■□□□□ 0.49
SSBP3-205ENST00000417664 U2AF1L4Q8WU68 220 aaKnown RBP18.1■□□□□ 0.49
SSBP3-205ENST00000417664 LMBR1Q8WVP7 490 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 RABGGTAQ92696 567 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 IFT122Q9HBG6 1241 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 CPSF3Q9UKF6 684 aaKnown RBP18.1■□□□□ 0.49
SSBP3-205ENST00000417664 GJD2Q9UKL4 321 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 SNX12Q9UMY4 172 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 AKT3Q9Y243 479 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 ZSWIM8A7E2V4 1837 aa18.1■□□□□ 0.49
SSBP3-205ENST00000417664 CTAGE15A4D2H0 777 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 TNPO2O14787 897 aaKnown RBP18.09■□□□□ 0.49
SSBP3-205ENST00000417664 DYNC1LI2O43237 492 aaPredicted RBP18.09■□□□□ 0.49
SSBP3-205ENST00000417664 CA12O43570 354 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 F2P00734 622 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 HLA-DRAP01903 254 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 CTAGE8P0CG41 777 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 PIK3CAP42336 1068 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 CPT1AP50416 773 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 BIRC3Q13489 604 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 ELF2Q15723 593 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 ERCC6LQ2NKX8 1250 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 TDRD10Q5VZ19 366 aaKnown RBP18.09■□□□□ 0.49
SSBP3-205ENST00000417664 CTAGE6Q86UF2 777 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms