RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 MTCL1Q9Y4B5 1905 aaKnown RBP20.3■□□□□ 0.84
VPS16-204ENST00000417508 C2CD4DB7Z1M9 353 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 TEX28O15482 410 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 GLUD1P00367 558 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 TDRD5Q8NAT2 981 aaKnown RBP20.3■□□□□ 0.84
VPS16-204ENST00000417508 ACSF2Q96CM8 615 aaPredicted RBP20.3■□□□□ 0.84
VPS16-204ENST00000417508 PRRX2Q99811 253 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 TIPINQ9BVW5 301 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 GPR62Q9BZJ7 368 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 PLEKHA4Q9H4M7 779 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 C17orf75Q9HAS0 396 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 SNTG2Q9NY99 539 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 CDH22Q9UJ99 828 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 SORCS3Q9UPU3 1222 aa20.3■□□□□ 0.84
VPS16-204ENST00000417508 RBM19Q9Y4C8 960 aaKnown RBP20.3■□□□□ 0.84
VPS16-204ENST00000417508 TTLL13PA6NNM8 815 aa20.29■□□□□ 0.84
VPS16-204ENST00000417508 H3BQV1 296 aa20.29■□□□□ 0.84
VPS16-204ENST00000417508 WEE2P0C1S8 567 aa20.29■□□□□ 0.84
VPS16-204ENST00000417508 LIG1P18858 919 aa20.29■□□□□ 0.84
VPS16-204ENST00000417508 HSP90AA2PQ14568 343 aaPredicted RBP20.29■□□□□ 0.84
VPS16-204ENST00000417508 KANK3Q6NY19 840 aa20.29■□□□□ 0.84
VPS16-204ENST00000417508 OTOP3Q7RTS5 596 aa20.29■□□□□ 0.84
VPS16-204ENST00000417508 SUGP1Q8IWZ8 645 aaKnown RBP20.29■□□□□ 0.84
VPS16-204ENST00000417508 FBXL6Q8N531 539 aa20.29■□□□□ 0.84
VPS16-204ENST00000417508 KREMEN2Q8NCW0 462 aa20.29■□□□□ 0.84
VPS16-204ENST00000417508 DRC1Q96MC2 740 aa20.29■□□□□ 0.84
VPS16-204ENST00000417508 TMEM134Q9H6X4 195 aa20.29■□□□□ 0.84
VPS16-204ENST00000417508 SF3B1O75533 1304 aaKnown RBP eCLIP20.28■□□□□ 0.843e-6■■■■■ 137.9
VPS16-204ENST00000417508 E9PMD0 336 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 RECQL4O94761 1208 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 SP100P23497 879 aaPredicted RBP20.28■□□□□ 0.84
VPS16-204ENST00000417508 GJB2P29033 226 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 HOXD11P31277 338 aaPredicted RBP20.28■□□□□ 0.84
VPS16-204ENST00000417508 ATP2C1P98194 919 aaPredicted RBP20.28■□□□□ 0.84
VPS16-204ENST00000417508 ELAVL2Q12926 359 aaKnown RBP20.28■□□□□ 0.84
VPS16-204ENST00000417508 MTMR3Q13615 1198 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 IL17AQ16552 155 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 ATF7IP2Q5U623 682 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 ARL6IP4Q66PJ3 421 aaKnown RBP20.28■□□□□ 0.84
VPS16-204ENST00000417508 CCDC149Q6ZUS6 474 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 ASIC4Q96FT7 647 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 NT5C3AQ9H0P0 336 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 MAN1C1Q9NR34 630 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 TNFSF13BQ9Y275 285 aa20.28■□□□□ 0.84
VPS16-204ENST00000417508 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.28■□□□□ 0.84
VPS16-204ENST00000417508 CCDC169A6NNP5 214 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 F8W810 466 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 PTGESO14684 152 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 PAPLNO95428 1278 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 NPTX2P47972 431 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 DMP1Q13316 513 aaPredicted RBP20.27■□□□□ 0.84
VPS16-204ENST00000417508 HYIQ5T013 277 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 NT5DC1Q5TFE4 455 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 EEF1DP3Q658K8 133 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 RINT1Q6NUQ1 792 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 PDXDC1Q6P996 788 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 C1orf186Q6ZWK4 172 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 NTPCRQ9BSD7 190 aaKnown RBP20.27■□□□□ 0.84
VPS16-204ENST00000417508 MMTAG2Q9BU76 263 aaKnown RBP20.27■□□□□ 0.84
VPS16-204ENST00000417508 POLD4Q9HCU8 107 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 LIMD1Q9UGP4 676 aa20.27■□□□□ 0.84
VPS16-204ENST00000417508 CCDC195A0A1B0GUA6 201 aa20.26■□□□□ 0.83
VPS16-204ENST00000417508 SLC26A4O43511 780 aa20.26■□□□□ 0.83
VPS16-204ENST00000417508 CDC25AP30304 524 aa20.26■□□□□ 0.83
VPS16-204ENST00000417508 PEX3P56589 373 aa20.26■□□□□ 0.83
VPS16-204ENST00000417508 LILRA6Q6PI73 481 aa20.26■□□□□ 0.83
VPS16-204ENST00000417508 RIN2Q8WYP3 895 aaPredicted RBP20.26■□□□□ 0.83
VPS16-204ENST00000417508 TTPALQ9BTX7 342 aa20.26■□□□□ 0.83
VPS16-204ENST00000417508 KIFC3Q9BVG8 833 aa20.26■□□□□ 0.83
VPS16-204ENST00000417508 KCND2Q9NZV8 630 aa20.26■□□□□ 0.83
VPS16-204ENST00000417508 SMC3Q9UQE7 1217 aa20.26■□□□□ 0.83
VPS16-204ENST00000417508 TRIP11Q15643 1979 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 PP2D1A8MPX8 630 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 HIP1RO75146 1068 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 EDN1P05305 212 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 GUCY2CP25092 1073 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 NAB2Q15742 525 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 DAW1Q8N136 415 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 STAMQ92783 540 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 ACO2Q99798 780 aaKnown RBP20.25■□□□□ 0.83
VPS16-204ENST00000417508 MRPL4Q9BYD3 311 aaKnown RBP20.25■□□□□ 0.83
VPS16-204ENST00000417508 KMT5AQ9NQR1 393 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 ZDHHC7Q9NXF8 308 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 ARHGAP28Q9P2N2 729 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 USP20Q9Y2K6 914 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 GDAQ9Y2T3 454 aa20.25■□□□□ 0.83
VPS16-204ENST00000417508 DENND4AQ7Z401 1863 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 CASTOR2A6NHX0 329 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 NUBP1P53384 320 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 LARP1BQ659C4 914 aaKnown RBP20.24■□□□□ 0.83
VPS16-204ENST00000417508 DCLRE1AQ6PJP8 1040 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 PALB2Q86YC2 1186 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 SYT2Q8N9I0 419 aaPredicted RBP20.24■□□□□ 0.83
VPS16-204ENST00000417508 SPIRE2Q8WWL2 714 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 PIK3R5Q8WYR1 880 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 RABGGTAQ92696 567 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 AK8Q96MA6 479 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 UROC1Q96N76 676 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 PAAF1Q9BRP4 392 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 CCDC94Q9BW85 323 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms