RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
CPNE1-208ENST00000414711 MB21D2Q8IYB1 491 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-208ENST00000414711 SMG8Q8ND04 991 aaKnown RBP17.67■□□□□ 0.42
CPNE1-208ENST00000414711 CNNM3Q8NE01 707 aa17.67■□□□□ 0.42
CPNE1-208ENST00000414711 IRF7Q92985 503 aa17.67■□□□□ 0.42
CPNE1-208ENST00000414711 ZFP42Q96MM3 310 aa17.67■□□□□ 0.42
CPNE1-208ENST00000414711 CLSTN3Q9BQT9 956 aa17.67■□□□□ 0.42
CPNE1-208ENST00000414711 TRMT61BQ9BVS5 477 aaKnown RBP17.67■□□□□ 0.42
CPNE1-208ENST00000414711 IFT122Q9HBG6 1241 aa17.67■□□□□ 0.42
CPNE1-208ENST00000414711 DISC1Q9NRI5 854 aa17.67■□□□□ 0.42
CPNE1-208ENST00000414711 PCDHGA5Q9Y5G8 931 aa17.67■□□□□ 0.42
CPNE1-208ENST00000414711 SF3B1O75533 1304 aaKnown RBP eCLIP17.67■□□□□ 0.426e-7■■■■■ 71.8
CPNE1-208ENST00000414711 TICRRQ7Z2Z1 1910 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 SPAG17Q6Q759 2223 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 CYP3A4P08684 503 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 CEBPBP17676 345 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 HOXA11P31270 313 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-208ENST00000414711 MPLP40238 635 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 CLK2P49760 499 aaKnown RBP17.66■□□□□ 0.42
CPNE1-208ENST00000414711 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-208ENST00000414711 SH3PXD2AQ5TCZ1 1133 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 TCEAL6Q6IPX3 200 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 Q6ZS52 159 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 CRYGNQ8WXF5 182 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 TCEAL3Q969E4 200 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 CEP89Q96ST8 783 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 EDEM2Q9BV94 578 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 LNPKQ9C0E8 428 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 ZNF334Q9HCZ1 680 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-208ENST00000414711 TRPV5Q9NQA5 729 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 MIOSQ9NXC5 875 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 IPPQ9Y573 584 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 IGSF10Q6WRI0 2623 aa17.66■□□□□ 0.42
CPNE1-208ENST00000414711 TDRD15B5MCY1 1934 aaKnown RBP17.65■□□□□ 0.42
CPNE1-208ENST00000414711 TMEM150BA6NC51 233 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 RHOP08100 348 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 CALM1P0DP23 149 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 CALM2P0DP24 149 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 CALM3P0DP25 149 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 CCNE1P24864 410 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 HOXA6P31267 233 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 PSMD5Q16401 504 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 POTEHQ6S545 545 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 CACNA2D4Q7Z3S7 1137 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 KBTBD6Q86V97 674 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 RAB11FIP4Q86YS3 637 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 MAP4K3Q8IVH8 894 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 GAB3Q8WWW8 586 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 PIK3R5Q8WYR1 880 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 SH2D3AQ9BRG2 576 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 ZFP14Q9HCL3 533 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 VPS45Q9NRW7 570 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 RBM12Q9NTZ6 932 aaKnown RBP17.65■□□□□ 0.42
CPNE1-208ENST00000414711 C2orf42Q9NWW7 574 aa17.65■□□□□ 0.42
CPNE1-208ENST00000414711 SMCO2A6NFE2 343 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 CCDC69A6NI79 296 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 ADAM12O43184 909 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 CHMP2AO43633 222 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 RPP40O75818 363 aaKnown RBP17.64■□□□□ 0.41
CPNE1-208ENST00000414711 NEFLP07196 543 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 GDI1P31150 447 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 HOXC13P31276 330 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 PRR16Q569H4 304 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 CASC1Q6TDU7 716 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 RABGGTAQ92696 567 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 TTPALQ9BTX7 342 aa17.64■□□□□ 0.41
CPNE1-208ENST00000414711 NIFKQ9BYG3 293 aaKnown RBP17.64■□□□□ 0.41
CPNE1-208ENST00000414711 LAMA1P25391 3075 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 C4orf47A7E2U8 309 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 TADA2AO75478 443 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 UVSSAQ2YD98 709 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 FAM78AQ5JUQ0 283 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 DAB2IPQ5VWQ8 1189 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 JAKMIP3Q5VZ66 844 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 CEP57Q86XR8 500 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 LNX1Q8TBB1 728 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-208ENST00000414711 EIF2AQ9BY44 585 aaKnown RBP17.63■□□□□ 0.41
CPNE1-208ENST00000414711 GLT8D2Q9H1C3 349 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 MINDY3Q9H8M7 445 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 AVENQ9NQS1 362 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-208ENST00000414711 HES2Q9Y543 173 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 CNTNAP5Q8WYK1 1306 aa17.63■□□□□ 0.41
CPNE1-208ENST00000414711 CEACAM1P13688 526 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 PSMC3P17980 439 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 SFNP31947 248 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 JAK3P52333 1124 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 HSP90AA2PQ14568 343 aaPredicted RBP17.62■□□□□ 0.41
CPNE1-208ENST00000414711 XKR3Q5GH77 459 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 KIAA1211LQ6NV74 962 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 VITQ6UXI7 678 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 PDZD3Q86UT5 571 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 MSANTD3Q96H12 275 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 APOL6Q9BWW8 343 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 NEUROG3Q9Y4Z2 214 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 COL4A3BPQ9Y5P4 624 aa17.62■□□□□ 0.41
CPNE1-208ENST00000414711 ADAMTS20P59510 1910 aa17.61■□□□□ 0.41
CPNE1-208ENST00000414711 SH2B2O14492 632 aaPredicted RBP17.61■□□□□ 0.41
CPNE1-208ENST00000414711 NRG2O14511 850 aaPredicted RBP17.61■□□□□ 0.41
CPNE1-208ENST00000414711 PRC1O43663 620 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms