RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 H3BQ06 376 aaPredicted RBP17.76■□□□□ 0.43
DDR1-230ENST00000412274 TRAK2O60296 914 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 CUTAO60888 179 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 RECQL4O94761 1208 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 C1RP00736 705 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 SOD2P04179 222 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 BECN1Q14457 450 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 DHX8Q14562 1220 aaKnown RBP17.76■□□□□ 0.43
DDR1-230ENST00000412274 SPECC1Q5M775 1068 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 EEF1DP3Q658K8 133 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 HAUS6Q7Z4H7 955 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 MSLNLQ96KJ4 702 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 UROC1Q96N76 676 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 PYM1Q9BRP8 204 aaKnown RBP17.76■□□□□ 0.43
DDR1-230ENST00000412274 TARS2Q9BW92 718 aaKnown RBP17.76■□□□□ 0.43
DDR1-230ENST00000412274 ST6GALNAC4Q9H4F1 302 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 MRPL17Q9NRX2 175 aaKnown RBP17.76■□□□□ 0.43
DDR1-230ENST00000412274 KLK14Q9P0G3 267 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 DPP7Q9UHL4 492 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 ATP6V1DQ9Y5K8 247 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 MYH11P35749 1972 aa17.76■□□□□ 0.43
DDR1-230ENST00000412274 TDRD15B5MCY1 1934 aaKnown RBP17.76■□□□□ 0.43
DDR1-230ENST00000412274 HIDE1A8MVS5 230 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 CLDN3O15551 220 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 EDN1P05305 212 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 GAP43P17677 238 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 GTF2F1P35269 517 aaKnown RBP eCLIP17.75■□□□□ 0.438e-7■■■■□ 24.7
DDR1-230ENST00000412274 STAT6P42226 847 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 CREMQ03060 361 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 KCNC3Q14003 757 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 USP49Q70CQ1 688 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 TAS1R3Q7RTX0 852 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 TMEM173Q86WV6 379 aaPredicted RBP17.75■□□□□ 0.43
DDR1-230ENST00000412274 FAM178BQ8IXR5 827 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 ACAP3Q96P50 834 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 TSPAN18Q96SJ8 248 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 POP1Q99575 1024 aaKnown RBP17.75■□□□□ 0.43
DDR1-230ENST00000412274 HERC2P3Q9BVR0 1158 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 CDT1Q9H211 546 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 SLC38A7Q9NVC3 462 aa17.75■□□□□ 0.43
DDR1-230ENST00000412274 MYH15Q9Y2K3 1946 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 NPHP3-ACAD11A0A0J9YXS1 232 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.74■□□□□ 0.43
DDR1-230ENST00000412274 PER2O15055 1255 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 TBX10O75333 385 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 TADA2AO75478 443 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 PIGRP01833 764 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 URODP06132 367 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 CA8P35219 290 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 AMPD3Q01432 767 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 MCL1Q07820 350 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 ELAVL2Q12926 359 aaKnown RBP17.74■□□□□ 0.43
DDR1-230ENST00000412274 NOLC1Q14978 699 aaKnown RBP eCLIP17.74■□□□□ 0.43
DDR1-230ENST00000412274 SMAD2Q15796 467 aaKnown RBP17.74■□□□□ 0.43
DDR1-230ENST00000412274 TPRNQ4KMQ1 711 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 XKR4Q5GH76 650 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 ELMSAN1Q6PJG2 1045 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 SMRP1Q8NCR6 262 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 HVCN1Q96D96 273 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 BICD1Q96G01 975 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.74■□□□□ 0.43
DDR1-230ENST00000412274 DZANK1Q9NVP4 752 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 CLEC1BQ9P126 229 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 TFIP11Q9UBB9 837 aaKnown RBP17.74■□□□□ 0.43
DDR1-230ENST00000412274 ADAM28Q9UKQ2 775 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 TBX20Q9UMR3 447 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 GDAQ9Y2T3 454 aa17.74■□□□□ 0.43
DDR1-230ENST00000412274 PRG3Q9Y2Y8 225 aaPredicted RBP17.74■□□□□ 0.43
DDR1-230ENST00000412274 SF3B1O75533 1304 aaKnown RBP eCLIP17.73■□□□□ 0.438e-6■■■■■ 107
DDR1-230ENST00000412274 VCANP13611 3396 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 K7ENM7 598 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 PTGESO14684 152 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 LINC01565O15544 149 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 MBTPS2O43462 519 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 B4GALT3O60512 393 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 GLP2RO95838 553 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 EFEMP2O95967 443 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 LIG4P49917 911 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 GTF2BQ00403 316 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 DLX2Q07687 328 aaPredicted RBP17.73■□□□□ 0.43
DDR1-230ENST00000412274 HSP90AA2PQ14568 343 aaPredicted RBP17.73■□□□□ 0.43
DDR1-230ENST00000412274 PTPN14Q15678 1187 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 USP41Q3LFD5 358 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 KIAA1841Q6NSI8 718 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 PDXDC1Q6P996 788 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 ALKAL1Q6UXT8 129 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 RNF168Q8IYW5 571 aaPredicted RBP17.73■□□□□ 0.43
DDR1-230ENST00000412274 LRRC15Q8TF66 581 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 BCL7CQ8WUZ0 217 aaPredicted RBP17.73■□□□□ 0.43
DDR1-230ENST00000412274 DDX12PQ92771 950 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 DDX27Q96GQ7 796 aaKnown RBP17.73■□□□□ 0.43
DDR1-230ENST00000412274 TNMDQ9H2S6 317 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 ZHX3Q9H4I2 956 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 PLEKHA5Q9HAU0 1116 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 MAGEF1Q9HAY2 307 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 MARCH5Q9NX47 278 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 USP20Q9Y2K6 914 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 PCDHGC5Q9Y5F6 944 aa17.73■□□□□ 0.43
DDR1-230ENST00000412274 TMEM189-UBE2V1I3L0A0 370 aa17.72■□□□□ 0.43
DDR1-230ENST00000412274 ABLIM1O14639 778 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms