RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 WARS2Q9UGM6 360 aaKnown RBP19.42■□□□□ 0.7
HCG11-201ENST00000411553 PCDHGB4Q9UN71 923 aa19.42■□□□□ 0.7
HCG11-201ENST00000411553 PNMA6AP0CW24 399 aaPredicted RBP19.41■□□□□ 0.7
HCG11-201ENST00000411553 ARFIP2P53365 341 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 WDR72Q3MJ13 1102 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 BEND6Q5SZJ8 279 aaPredicted RBP19.41■□□□□ 0.7
HCG11-201ENST00000411553 C12orf60Q5U649 245 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 LMBRD2Q68DH5 695 aaPredicted RBP19.41■□□□□ 0.7
HCG11-201ENST00000411553 ZC3H18Q86VM9 953 aaKnown RBP19.41■□□□□ 0.7
HCG11-201ENST00000411553 SGMS1Q86VZ5 419 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 ATP9BO43861 1147 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 VCPP55072 806 aaKnown RBP19.41■□□□□ 0.7
HCG11-201ENST00000411553 NAF1Q96HR8 494 aaKnown RBP19.41■□□□□ 0.7
HCG11-201ENST00000411553 TRPC7Q9HCX4 862 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 DCTN4Q9UJW0 460 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 TTC26A0AVF1 554 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 PIK3R2O00459 728 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 PDXDC1Q6P996 788 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 TMEM106CQ9BVX2 250 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 KATNAL1Q9BW62 490 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 SFMBT1Q9UHJ3 866 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 RNF103-CHMP3A0A140T963 221 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 ALDH1A1P00352 501 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 XKR3Q5GH77 459 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 PPHLN1Q8NEY8 458 aaKnown RBP19.41■□□□□ 0.7
HCG11-201ENST00000411553 C1orf54Q8WWF1 131 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 MTIF3Q9H2K0 278 aaKnown RBP19.41■□□□□ 0.7
HCG11-201ENST00000411553 LSM7Q9UK45 103 aaKnown RBP19.41■□□□□ 0.7
HCG11-201ENST00000411553 SHROOM2Q13796 1616 aa19.41■□□□□ 0.7
HCG11-201ENST00000411553 PDIA5Q14554 519 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 TAF1CQ15572 869 aaPredicted RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 SMAD1Q15797 465 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 TKFCQ3LXA3 575 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 STX18Q9P2W9 335 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 AGAP1Q9UPQ3 857 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 CYP26A1O43174 497 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 DGAT1O75907 488 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 NMT1P30419 496 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 DDX53Q86TM3 631 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 GJD4Q96KN9 370 aaPredicted RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 EML4Q9HC35 981 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 MLXIPLQ9NP71 852 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 SPATS2LQ9NUQ6 558 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 NOP53Q9NZM5 478 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 KBTBD13C9JR72 458 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 GGCXP38435 758 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 SLC1A1P43005 524 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 ACTR2P61160 394 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 PPP2R2AP63151 447 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 STILQ15468 1287 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 RGS9BPQ6ZS82 235 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 TEX13BQ9BXU2 312 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 KDM4CQ9H3R0 1056 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 RTN2O75298 545 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 TADA2AO75478 443 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 EIF3EP60228 445 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 RBP5P82980 135 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 ANKS3Q6ZW76 656 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 ZNF467Q7Z7K2 595 aaPredicted RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 TGS1Q96RS0 853 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 TAF1DQ9H5J8 278 aaPredicted RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 SLC16A3O15427 465 aaKnown RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 ARSEP51690 589 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 EN1Q05925 392 aaPredicted RBP19.4■□□□□ 0.7
HCG11-201ENST00000411553 HECW2Q9P2P5 1572 aa19.4■□□□□ 0.7
HCG11-201ENST00000411553 TNS3Q68CZ2 1445 aa19.39■□□□□ 0.7
HCG11-201ENST00000411553 A0A1W2PQC6 194 aa19.39■□□□□ 0.7
HCG11-201ENST00000411553 OCM2P0CE71 109 aa19.39■□□□□ 0.7
HCG11-201ENST00000411553 OCMP0CE72 109 aaPredicted RBP19.39■□□□□ 0.7
HCG11-201ENST00000411553 FOXO4P98177 505 aa19.39■□□□□ 0.7
HCG11-201ENST00000411553 RRM2BQ7LG56 351 aa19.39■□□□□ 0.7
HCG11-201ENST00000411553 LPAR1Q92633 364 aa19.39■□□□□ 0.7
HCG11-201ENST00000411553 SMARCAD1Q9H4L7 1026 aa19.39■□□□□ 0.7
HCG11-201ENST00000411553 PCDHB8Q9UN66 801 aa19.39■□□□□ 0.7
HCG11-201ENST00000411553 C19orf81C9J6K1 198 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 H0Y3Z8 333 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 CHRNA5P30532 468 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 ST8SIA6P61647 398 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 ABTB1Q969K4 478 aaPredicted RBP19.39■□□□□ 0.69
HCG11-201ENST00000411553 C18orf8Q96DM3 657 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 OSBPL5Q9H0X9 879 aaPredicted RBP19.39■□□□□ 0.69
HCG11-201ENST00000411553 NDE1Q9NXR1 346 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 RGL1Q9NZL6 768 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 OR9Q1Q8NGQ5 310 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 MAGI3Q5TCQ9 1506 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 ASMTLO95671 621 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 SCP2P22307 547 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 GTF2H3Q13889 308 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 DHX34Q14147 1143 aaKnown RBP19.39■□□□□ 0.69
HCG11-201ENST00000411553 STRIP1Q5VSL9 837 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 GSPT2Q8IYD1 628 aaKnown RBP19.39■□□□□ 0.69
HCG11-201ENST00000411553 HSPBP1Q9NZL4 362 aa19.39■□□□□ 0.69
HCG11-201ENST00000411553 VGLL3A8MV65 326 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 STXBP3O00186 592 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 KCNB1Q14721 858 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 RPAINQ86UA6 219 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 TBC1D19Q8N5T2 526 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 TBC1D16Q8TBP0 767 aa19.38■□□□□ 0.69
HCG11-201ENST00000411553 CNOT7Q9UIV1 285 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms