RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 PIGOQ8TEQ8 1089 aa18.52■□□□□ 0.56
MRPL55-220ENST00000411464 POLR3FQ9H1D9 316 aaPredicted RBP18.52■□□□□ 0.56
MRPL55-220ENST00000411464 ARHGEF3Q9NR81 526 aa18.52■□□□□ 0.56
MRPL55-220ENST00000411464 ZMYM2Q9UBW7 1377 aa18.52■□□□□ 0.55
MRPL55-220ENST00000411464 USO1O60763 962 aaKnown RBP18.51■□□□□ 0.55
MRPL55-220ENST00000411464 DCNP07585 359 aaKnown RBP18.51■□□□□ 0.55
MRPL55-220ENST00000411464 XRCC6P12956 609 aaKnown RBP eCLIP18.51■□□□□ 0.55
MRPL55-220ENST00000411464 FSHRP23945 695 aa18.51■□□□□ 0.55
MRPL55-220ENST00000411464 TUSC3Q13454 348 aa18.51■□□□□ 0.55
MRPL55-220ENST00000411464 HTR4Q13639 388 aa18.51■□□□□ 0.55
MRPL55-220ENST00000411464 DCLRE1AQ6PJP8 1040 aa18.51■□□□□ 0.55
MRPL55-220ENST00000411464 MAEAQ7L5Y9 396 aa18.51■□□□□ 0.55
MRPL55-220ENST00000411464 CEP57Q86XR8 500 aa18.51■□□□□ 0.55
MRPL55-220ENST00000411464 TTPALQ9BTX7 342 aa18.51■□□□□ 0.55
MRPL55-220ENST00000411464 SLC2A4RGQ9NR83 387 aa18.51■□□□□ 0.55
MRPL55-220ENST00000411464 PRMT7Q9NVM4 692 aaPredicted RBP18.51■□□□□ 0.55
MRPL55-220ENST00000411464 NUMBLQ9Y6R0 609 aa18.51■□□□□ 0.55
MRPL55-220ENST00000411464 A0A087WWV3 80 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 NEMFO60524 1076 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 CTDNEP1O95476 244 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 TMEM132AQ24JP5 1023 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 RTP2Q5QGT7 225 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 LIN9Q5TKA1 542 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 GRASPQ7Z6J2 395 aaPredicted RBP18.5■□□□□ 0.55
MRPL55-220ENST00000411464 ZBTB8OSQ8IWT0 167 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 ST13P5Q8NFI4 369 aaPredicted RBP18.5■□□□□ 0.55
MRPL55-220ENST00000411464 HASPINQ8TF76 798 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 TNFRSF25Q93038 417 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 SHDQ96IW2 340 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 PRIMPOLQ96LW4 560 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 CACNG4Q9UBN1 327 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 R4GN57 208 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 DENND4AQ7Z401 1863 aa18.5■□□□□ 0.55
MRPL55-220ENST00000411464 FAM186AA6NE01 2351 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 CASTOR2A6NHX0 329 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 HNRNPA1P09651 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
MRPL55-220ENST00000411464 ANKRD1Q15327 319 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 FAM171A1Q5VUB5 890 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 ZC3H14Q6PJT7 736 aaKnown RBP18.49■□□□□ 0.55
MRPL55-220ENST00000411464 POTEGQ6S5H5 508 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 C1orf210Q8IVY1 113 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 MCPH1Q8NEM0 835 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 PAAF1Q9BRP4 392 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 GPRC5CQ9NQ84 441 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 FBXW11Q9UKB1 542 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 CDH7Q9ULB5 785 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 SPTBN4Q9H254 2564 aa18.49■□□□□ 0.55
MRPL55-220ENST00000411464 THP07101 528 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 FDPSP14324 419 aaKnown RBP18.48■□□□□ 0.55
MRPL55-220ENST00000411464 ATP2B1P20020 1258 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 GPC5P78333 572 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 ELAVL2Q12926 359 aaKnown RBP18.48■□□□□ 0.55
MRPL55-220ENST00000411464 PSMD5Q16401 504 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 PPM1LQ5SGD2 360 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 PDXDC1Q6P996 788 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 LNX1Q8TBB1 728 aaPredicted RBP18.48■□□□□ 0.55
MRPL55-220ENST00000411464 PIK3R5Q8WYR1 880 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 CLSTN3Q9BQT9 956 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 FZD8Q9H461 694 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 POLIQ9UNA4 740 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 WDR87Q6ZQQ6 2873 aa18.48■□□□□ 0.55
MRPL55-220ENST00000411464 BTBD18B2RXH4 712 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 N4BP3O15049 544 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 XYLBO75191 536 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 KIF4AO95239 1232 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 C8AP07357 584 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 STARD6P59095 220 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 PRPF4BQ13523 1007 aaKnown RBP18.47■□□□□ 0.55
MRPL55-220ENST00000411464 TRIM29Q14134 588 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 FAM187BQ17R55 369 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 PARM1Q6UWI2 310 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 MTSS1LQ765P7 747 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 FGF14Q92915 247 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 MTMR9Q96QG7 549 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 HINFPQ9BQA5 517 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 ADPGKQ9BRR6 497 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 RPP25Q9BUL9 199 aaKnown RBP18.47■□□□□ 0.55
MRPL55-220ENST00000411464 C2orf40Q9H1Z8 148 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 SNTG2Q9NY99 539 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 DLGAP2Q9P1A6 1054 aa18.47■□□□□ 0.55
MRPL55-220ENST00000411464 POTEMA6NI47 508 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 PTGESO14684 152 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 CCL16O15467 120 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 SP9P0CG40 484 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 HOXA9P31269 272 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 NTHL1P78549 312 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 MAPK6Q16659 721 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 CDCA2Q69YH5 1023 aaPredicted RBP18.46■□□□□ 0.55
MRPL55-220ENST00000411464 DIS3L2Q8IYB7 885 aaKnown RBP18.46■□□□□ 0.55
MRPL55-220ENST00000411464 NECAB1Q8N987 351 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 PJA1Q8NG27 643 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 FGF13Q92913 245 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 NACC1Q96RE7 527 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 FOXQ1Q9C009 403 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 PDZD7Q9H5P4 517 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 TUFT1Q9NNX1 390 aa18.46■□□□□ 0.55
MRPL55-220ENST00000411464 RECQL4O94761 1208 aa18.45■□□□□ 0.54
MRPL55-220ENST00000411464 SPATA31C1P0DKV0 1188 aa18.45■□□□□ 0.54
MRPL55-220ENST00000411464 LIG1P18858 919 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms