RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 ITGA4P13612 1032 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 RGS2P41220 211 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 HSD17B4P51659 736 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 CDH6P55285 790 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 ROR1Q01973 937 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 MUM1Q2TAK8 710 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 EFCAB12Q6NXP0 572 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 GMCL1Q96IK5 515 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 SPON2Q9BUD6 331 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 UVRAGQ9P2Y5 699 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 SCAF8Q9UPN6 1271 aaKnown RBP9.64□□□□□ -0.87
PBRM1-208ENST00000410007 UBE2Q2LH0YL09 131 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 POLRMTO00411 1230 aaKnown RBP9.64□□□□□ -0.87
PBRM1-208ENST00000410007 P4HA2O15460 535 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 CXCL9Q07325 125 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 TMTC4Q5T4D3 741 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 TRIM67Q6ZTA4 783 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 FAM83AQ86UY5 434 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 ACER1Q8TDN7 264 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 PDCD6IPQ8WUM4 868 aaKnown RBP9.64□□□□□ -0.87
PBRM1-208ENST00000410007 GLT1D1Q96MS3 346 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 SIK2Q9H0K1 926 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 FBXO28Q9NVF7 368 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 HPS5Q9UPZ3 1129 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 COPEO14579 308 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 CYP2C19P33261 490 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 TTC19Q6DKK2 380 aaPredicted RBP9.64□□□□□ -0.87
PBRM1-208ENST00000410007 NUDT18Q6ZVK8 323 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 RNF180Q86T96 592 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 TRIM59Q8IWR1 403 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 VPS33BQ9H267 617 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 EPS15L1Q9UBC2 864 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 TJP2Q9UDY2 1190 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 TMX2Q9Y320 296 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 IQGAP1P46940 1657 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 PPP1R12AO14974 1030 aaPredicted RBP9.63□□□□□ -0.87
PBRM1-208ENST00000410007 MYBP10242 640 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 CYP11B2P19099 503 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 MUTP22033 750 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 PCSK1P29120 753 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 EPHX2P34913 555 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 ZNF211Q13398 564 aaPredicted RBP9.63□□□□□ -0.87
PBRM1-208ENST00000410007 TNS2Q63HR2 1409 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 ITIH6Q6UXX5 1313 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 SALL1Q9NSC2 1324 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 LCP1P13796 627 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 GRIK1P39086 918 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 CLCN6P51797 869 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 SLC18A3Q16572 532 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 ELOA2Q8IYF1 753 aaPredicted RBP9.63□□□□□ -0.87
PBRM1-208ENST00000410007 GMCL1P1Q8NEA9 526 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 MED15Q96RN5 788 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 BCL9O00512 1426 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 SRGAP2O75044 1071 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 CTDNEP1O95476 244 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 UCHL3P15374 230 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 ACTR2P61160 394 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 CCDC144BQ3MJ40 725 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 SV2CQ496J9 727 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 NOP9Q86U38 636 aaKnown RBP9.63□□□□□ -0.87
PBRM1-208ENST00000410007 RBBP8NLQ8NC74 664 aaPredicted RBP9.63□□□□□ -0.87
PBRM1-208ENST00000410007 SH3TC2Q8TF17 1288 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 TMEM8AQ9HCN3 771 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 SLIT1O75093 1534 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 EXTL3O43909 919 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 DRP2Q13474 957 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 SPARCL1Q14515 664 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 NFRKBQ6P4R8 1299 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 NOTUMQ6P988 496 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 PPP1R9AQ9ULJ8 1098 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 FIS1Q9Y3D6 152 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 TAF6LQ9Y6J9 622 aa9.63□□□□□ -0.87
PBRM1-208ENST00000410007 FAM205AQ6ZU69 1335 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 NVLO15381 856 aaKnown RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 MSH4O15457 936 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 TCF7P36402 384 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 CASP2P42575 452 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 AP1B1Q10567 949 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 IFT88Q13099 833 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 ZNF235Q14590 738 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 CC2D1AQ6P1N0 951 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 USP49Q70CQ1 688 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 PLEKHH3Q7Z736 793 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 CATSPER3Q86XQ3 398 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 DCP1BQ8IZD4 617 aaKnown RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 SYT2Q8N9I0 419 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 LBHD1Q9BQE6 289 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 PLAAQ9Y263 795 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 KPNA7A9QM74 516 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 APOL1O14791 398 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 KRT14P02533 472 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 CYBBP04839 570 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 CLTAP09496 248 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 GPS1Q13098 491 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 SLC12A1Q13621 1099 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 DHX34Q14147 1143 aaKnown RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 FRA10AC1Q70Z53 315 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 LRRC71Q8N4P6 559 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 ASIC4Q96FT7 647 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms