RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 COL9A1P20849 921 aa21.56■■□□□ 1.04
TSPAN4-209ENST00000409543 SYT1P21579 422 aa21.56■■□□□ 1.04
TSPAN4-209ENST00000409543 KLRC2P26717 231 aa21.56■■□□□ 1.04
TSPAN4-209ENST00000409543 GLUD2P49448 558 aa21.56■■□□□ 1.04
TSPAN4-209ENST00000409543 KIAA0319Q5VV43 1072 aa21.56■■□□□ 1.04
TSPAN4-209ENST00000409543 CALML4Q96GE6 196 aa21.56■■□□□ 1.04
TSPAN4-209ENST00000409543 ACO2Q99798 780 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-209ENST00000409543 MRPL4Q9BYD3 311 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-209ENST00000409543 ADAM28Q9UKQ2 775 aa21.56■■□□□ 1.04
TSPAN4-209ENST00000409543 K7ELQ4 463 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 C2CD2LO14523 706 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 SLC16A4O15374 487 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 CLCN4P51793 760 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 DSG1Q02413 1049 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 RAD51AP2Q09MP3 1159 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 HERC4Q5GLZ8 1057 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 FUT10Q6P4F1 479 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 TAS1R3Q7RTX0 852 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 GPR65Q8IYL9 337 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 RPGRIP1Q96KN7 1286 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 NECTIN4Q96NY8 510 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 RXFP1Q9HBX9 757 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 PTPRHQ9HD43 1115 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 CHST7Q9NS84 486 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 GDAQ9Y2T3 454 aa21.55■■□□□ 1.04
TSPAN4-209ENST00000409543 TADA2AO75478 443 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 SMTNP53814 917 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 GRIN1Q05586 938 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 RESTQ13127 1097 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 HSP90AA2PQ14568 343 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 NAB2Q15742 525 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 ARSHQ5FYA8 562 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 KIAA1841Q6NSI8 718 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 RABGGTAQ92696 567 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 FBXL18Q96ME1 805 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 TARS2Q9BW92 718 aaKnown RBP21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 GPR62Q9BZJ7 368 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 CXCL16Q9H2A7 254 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 MUTYHQ9UIF7 546 aa21.54■■□□□ 1.04
TSPAN4-209ENST00000409543 FAM86C2PA6NEL3 165 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 ADH1AP07327 375 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 GRM5P41594 1212 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 MTHFRP42898 656 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 PTPAQ15257 358 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 USP41Q3LFD5 358 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 ZNF568Q3ZCX4 644 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 RARS2Q5T160 578 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 C12orf76Q8N812 135 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 TMEM161BQ8NDZ6 487 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 RIPOR3Q96MK2 946 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 PAAF1Q9BRP4 392 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 CDT1Q9H211 546 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 CACNG4Q9UBN1 327 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 CLIC4Q9Y696 253 aa21.53■■□□□ 1.04
TSPAN4-209ENST00000409543 NPHP3-ACAD11A0A0J9YXS1 232 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 CASTOR2A6NHX0 329 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 TEX28O15482 410 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 MCF2P10911 925 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 PROZP22891 400 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 STRN3Q13033 797 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 ATAT1Q5SQI0 421 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 CCDC94Q9BW85 323 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 CCSER1Q9C0I3 900 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 BLOC1S4Q9NUP1 217 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 LARSQ9P2J5 1176 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 CDH22Q9UJ99 828 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 ODF2LQ9ULJ1 636 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 MYH11P35749 1972 aa21.52■■□□□ 1.04
TSPAN4-209ENST00000409543 SF3B1O75533 1304 aaKnown RBP eCLIP21.52■■□□□ 1.03
TSPAN4-209ENST00000409543 PRR33A8MZF0 331 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 ABLIM1O14639 778 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 BRD1O95696 1058 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 C1RP00736 705 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 MAPTP10636 758 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 PLCG1P19174 1290 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 YARSP54577 528 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 KARSQ15046 597 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 KANK3Q6NY19 840 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 MPZL3Q6UWV2 235 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 CEP120Q8N960 986 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 RASSF8Q8NHQ8 419 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 LRRC15Q8TF66 581 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 KCNN1Q92952 543 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 PPP1R10Q96QC0 940 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 TCHPQ9BT92 498 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 POMKQ9H5K3 350 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 SFXN1Q9H9B4 322 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 TOPORSQ9NS56 1045 aaPredicted RBP21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 MTMR6Q9Y217 621 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 NR2E1Q9Y466 385 aa21.51■■□□□ 1.03
TSPAN4-209ENST00000409543 H0YCG3 227 aa21.5■■□□□ 1.03
TSPAN4-209ENST00000409543 KIF4AO95239 1232 aa21.5■■□□□ 1.03
TSPAN4-209ENST00000409543 CACNB1Q02641 598 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-209ENST00000409543 XKR4Q5GH76 650 aa21.5■■□□□ 1.03
TSPAN4-209ENST00000409543 FAM173BQ6P4H8 233 aa21.5■■□□□ 1.03
TSPAN4-209ENST00000409543 ALKAL1Q6UXT8 129 aa21.5■■□□□ 1.03
TSPAN4-209ENST00000409543 ZPBP2Q6X784 338 aa21.5■■□□□ 1.03
TSPAN4-209ENST00000409543 ZBTB33Q86T24 672 aa21.5■■□□□ 1.03
TSPAN4-209ENST00000409543 GPBP1Q86WP2 473 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms