RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 PDCD7Q8N8D1 485 aaKnown RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 ANKRD42Q8N9B4 389 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 TERB1Q8NA31 727 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 MIGA1Q8NAN2 632 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 TTC13Q8NBP0 860 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 FAM13CQ8NE31 585 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 NEDD1Q8NHV4 660 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 SLC30A5Q8TAD4 765 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 MDM1Q8TC05 714 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 PARD3BQ8TEW8 1205 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 SREK1Q8WXA9 508 aaKnown RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 SCG3Q8WXD2 468 aaKnown RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 GATA6Q92908 595 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 RNF25Q96BH1 459 aaPredicted RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 DGCR14Q96DF8 476 aaKnown RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 ERP27Q96DN0 273 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 VCPIP1Q96JH7 1222 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 BTBD9Q96Q07 612 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 HAPLN3Q96S86 360 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 SERPINI1Q99574 410 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 EPAS1Q99814 870 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 AGPAT1Q99943 283 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 HAUS8Q9BT25 410 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 MMTAG2Q9BU76 263 aaKnown RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 SPATA16Q9BXB7 569 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 TRIM31Q9BZY9 425 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 NYXQ9GZU5 481 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 WWP1Q9H0M0 922 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 ASCC2Q9H1I8 757 aaPredicted RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 RANBP17Q9H2T7 1088 aaKnown RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 ADAM7Q9H2U9 754 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 KCTD10Q9H3F6 313 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 CDC42EP4Q9H3Q1 356 aaKnown RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 SEMA4AQ9H3S1 761 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 RIOX1Q9H6W3 641 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 NRDE2Q9H7Z3 1164 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 C17orf75Q9HAS0 396 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 MRPL47Q9HD33 250 aaKnown RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 TUFT1Q9NNX1 390 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 DCP1AQ9NPI6 582 aaPredicted RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 BLOC1S4Q9NUP1 217 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 ZDHHC7Q9NXF8 308 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 MCM9Q9NXL9 1143 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 PTTG2Q9NZH5 202 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 GCNT4Q9P109 453 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 APEX2Q9UBZ4 518 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 DDX25Q9UHL0 483 aaKnown RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 MAD2L2Q9UI95 211 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 SALL4Q9UJQ4 1053 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 DNAJC12Q9UKB3 198 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 GTF3C4Q9UKN8 822 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 TFR2Q9UP52 801 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 EXOC7Q9UPT5 735 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 ALG6Q9Y672 507 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 SCINQ9Y6U3 715 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 COL1A1P02452 1464 aaPredicted RBP3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 ARAP2Q8WZ64 1704 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 BCL9O00512 1426 aa3.02□□□□□ -1.93
SNORD88.1-201ENST00000408684 PLCH1Q4KWH8 1693 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 LRP5O75197 1615 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 EXOC1LA0A1B0GW35 172 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 SMIM23A6NLE4 172 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 SPECC1L-ADORA2AF8WAN1 911 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 H0YCG3 227 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 H0YJX3 145 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 H3BNX3 289 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 DDX3XO00571 662 aaKnown RBP eCLIP3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 CAPN9O14815 690 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 EPHB6O15197 1021 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 WDR46O15213 610 aaKnown RBP3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 GSC2O15499 205 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 PSTPIP1O43586 416 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 PRKAB2O43741 272 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 AP1G1O43747 822 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 OPHN1O60890 802 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 COBLO75128 1261 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 ZC3H11AO75152 810 aaKnown RBP eCLIP3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 LRRN2O75325 713 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 E2F6O75461 281 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 SKAP2O75563 359 aaPredicted RBP3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 FAM155BO75949 473 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 TOMM70O94826 608 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 FAM13AO94988 1023 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 ASMTLO95671 621 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 ESRRBO95718 433 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 NR3C1P04150 777 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 SHBGP04278 402 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 PDHA1P08559 390 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 FAM200BP0CF97 657 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 PIM1P11309 404 aaPredicted RBP3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 HARSP12081 509 aaKnown RBP3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 TAC1P20366 129 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 CA4P22748 312 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 HIBADHP31937 336 aaKnown RBP3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 GTF2H1P32780 548 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 TTKP33981 857 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 PGM1P36871 562 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 RANBP1P43487 201 aa3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 RPL5P46777 297 aaKnown RBP3.01□□□□□ -1.93
SNORD88.1-201ENST00000408684 RPL21P46778 160 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms