RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 SF3B1O75533 1304 aaKnown RBP eCLIP13.67□□□□□ -0.229e-7■■□□□ 14.3
PRAME-204ENST00000403441 FAM205CA6NFA0 338 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 BTBD18B2RXH4 712 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 B4GALT5O43286 388 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 PAPLNO95428 1278 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 NPTXRO95502 500 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 AKAP5P24588 427 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 ARL2P36404 184 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 MCM2P49736 904 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 GET4Q7L5D6 327 aaPredicted RBP13.67□□□□□ -0.22
PRAME-204ENST00000403441 GLYCTKQ8IVS8 523 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 DIS3L2Q8IYB7 885 aaKnown RBP13.67□□□□□ -0.22
PRAME-204ENST00000403441 FBXO18Q8NFZ0 1043 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 HSD17B14Q9BPX1 270 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 GPR62Q9BZJ7 368 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 PRKD2Q9BZL6 878 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 NT5C3AQ9H0P0 336 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 POLR3FQ9H1D9 316 aaPredicted RBP13.67□□□□□ -0.22
PRAME-204ENST00000403441 TBC1D17Q9HA65 648 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 MIOSQ9NXC5 875 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 CA14Q9ULX7 337 aa13.67□□□□□ -0.22
PRAME-204ENST00000403441 A0A1B0GUA9 196 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 KRBA1A5PL33 1030 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 LRRIQ4A6NIV6 560 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 NEMFO60524 1076 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 TADA2AO75478 443 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 LAMP2P13473 410 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 GLRA2P23416 452 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 RARRES1P49788 294 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 HSP90AA2PQ14568 343 aaPredicted RBP13.66□□□□□ -0.22
PRAME-204ENST00000403441 TMEM132AQ24JP5 1023 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 LIN9Q5TKA1 542 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 KCNG4Q8TDN1 519 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 SEMA4AQ9H3S1 761 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 TTC12Q9H892 705 aaPredicted RBP13.66□□□□□ -0.22
PRAME-204ENST00000403441 ARHGEF3Q9NR81 526 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 KLK14Q9P0G3 267 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 ZFP37Q9Y6Q3 630 aaPredicted RBP13.66□□□□□ -0.22
PRAME-204ENST00000403441 DMDP11532 3685 aa13.66□□□□□ -0.22
PRAME-204ENST00000403441 USO1O60763 962 aaKnown RBP13.65□□□□□ -0.22
PRAME-204ENST00000403441 ZMYND10O75800 440 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 RPL17P18621 184 aaKnown RBP13.65□□□□□ -0.22
PRAME-204ENST00000403441 FSHRP23945 695 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 TXKP42681 527 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 TUSC3Q13454 348 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 HTR4Q13639 388 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 ZC3H14Q6PJT7 736 aaKnown RBP13.65□□□□□ -0.22
PRAME-204ENST00000403441 ERMP1Q7Z2K6 904 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 CDR2LQ86X02 465 aaPredicted RBP13.65□□□□□ -0.22
PRAME-204ENST00000403441 ZBTB8OSQ8IWT0 167 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 MCPH1Q8NEM0 835 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 GPR152Q8TDT2 470 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 PIGOQ8TEQ8 1089 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 RABGGTAQ92696 567 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 PRIMPOLQ96LW4 560 aa13.65□□□□□ -0.22
PRAME-204ENST00000403441 PRMT7Q9NVM4 692 aaPredicted RBP13.65□□□□□ -0.22
PRAME-204ENST00000403441 WDR87Q6ZQQ6 2873 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 DOCK8Q8NF50 2099 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 ANHXE9PGG2 379 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 WNT7AO00755 349 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 HNRNPA1P09651 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRAME-204ENST00000403441 XRCC6P12956 609 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRAME-204ENST00000403441 ID4P47928 161 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 TRIM29Q14134 588 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 SPECC1Q5M775 1068 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 RTP2Q5QGT7 225 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 PHLDB3Q6NSJ2 640 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 LILRA6Q6PI73 481 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 PRSS55Q6UWB4 352 aaPredicted RBP13.64□□□□□ -0.23
PRAME-204ENST00000403441 HASPINQ8TF76 798 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 C8orf76Q96K31 380 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 TTPALQ9BTX7 342 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 FOXP1Q9H334 677 aaPredicted RBP13.64□□□□□ -0.23
PRAME-204ENST00000403441 SLC2A4RGQ9NR83 387 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 FBXW11Q9UKB1 542 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 SIT1Q9Y3P8 196 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 NUMBLQ9Y6R0 609 aa13.64□□□□□ -0.23
PRAME-204ENST00000403441 MTCL1Q9Y4B5 1905 aaKnown RBP13.64□□□□□ -0.23
PRAME-204ENST00000403441 EP300Q09472 2414 aaPredicted RBP13.63□□□□□ -0.23
PRAME-204ENST00000403441 CASTOR2A6NHX0 329 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 N4BP3O15049 544 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 XYLBO75191 536 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 LMNAP02545 664 aaKnown RBP13.63□□□□□ -0.23
PRAME-204ENST00000403441 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.233e-26■□□□□ 8.5
PRAME-204ENST00000403441 ELAVL2Q12926 359 aaKnown RBP13.63□□□□□ -0.23
PRAME-204ENST00000403441 CUL4AQ13619 759 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 PSMD5Q16401 504 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 PPM1LQ5SGD2 360 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 CDCA2Q69YH5 1023 aaPredicted RBP13.63□□□□□ -0.23
PRAME-204ENST00000403441 DCLRE1AQ6PJP8 1040 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 MAEAQ7L5Y9 396 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 CEP57Q86XR8 500 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 PIK3R5Q8WYR1 880 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 SHDQ96IW2 340 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 ADPGKQ9BRR6 497 aa13.63□□□□□ -0.23
PRAME-204ENST00000403441 C2orf40Q9H1Z8 148 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms