RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 SMYD5Q6GMV2 418 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 SLC39A4Q6P5W5 647 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 DNAAF5Q86Y56 855 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 ANKRD35Q8N283 1001 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 ZSWIM2Q8NEG5 633 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 FAM76AQ8TAV0 307 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 HELQQ8TDG4 1101 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 EPS8L1Q8TE68 723 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 IFT81Q8WYA0 676 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 CCDC127Q96BQ5 260 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 KREMEN1Q96MU8 473 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 KIFC3Q9BVG8 833 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 NRBP2Q9NSY0 501 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 NFU1Q9UMS0 254 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 CSADQ9Y600 493 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 SNCAIPQ9Y6H5 919 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 SYNGAP1Q96PV0 1343 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 IGKV6D-21A0A0A0MT36 114 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 SART1O43290 800 aaKnown RBP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 RPS6KA5O75582 802 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 SGPL1O95470 568 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 BPIFB4P59827 614 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 RNASE9P60153 205 aaKnown RBP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 CDR2Q01850 454 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 CFAP58Q5T655 872 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 TRMT1LQ7Z2T5 733 aaKnown RBP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 ZNF677Q86XU0 584 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 CD302Q8IX05 232 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 SEMA4DQ92854 862 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 LRRC45Q96CN5 670 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 GDAP1L1Q96MZ0 367 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 WNT8AQ9H1J5 351 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 GOLPH3Q9H4A6 298 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 DHX33Q9H6R0 707 aaKnown RBP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 FAM114A2Q9NRY5 505 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 TAS2R14Q9NYV8 317 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 CWC15Q9P013 229 aaKnown RBP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 UVRAGQ9P2Y5 699 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 WDR81Q562E7 1941 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 KIAA1217Q5T5P2 1943 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 DICER1Q9UPY3 1922 aaKnown RBP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 GOLGA6CA6NDK9 693 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 CYP1A2P05177 515 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 GOLGA6DP0CG33 693 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 CHRNB2P17787 502 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 ACTN2P35609 894 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 HSPA9P38646 679 aaKnown RBP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 GYS2P54840 703 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 CLDN10P78369 228 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 NEDD9Q14511 834 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 SV2AQ7L0J3 742 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 NOP9Q86U38 636 aaKnown RBP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 PROCA1Q8NCQ7 364 aaPredicted RBP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 C1orf131Q8NDD1 294 aaKnown RBP11.56□□□□□ -0.56
LINC00649-202ENST00000400353 DEPTORQ8TB45 409 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 TRIM11Q96F44 468 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 RUNDC3BQ96NL0 473 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 PORCNQ9H237 461 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 TMEM134Q9H6X4 195 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.56□□□□□ -0.564e-6■■■■■ 72.1
LINC00649-202ENST00000400353 C1orf112Q9NSG2 853 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 GOLGA6AQ9NYA3 693 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 GTF3C4Q9UKN8 822 aa11.56□□□□□ -0.56
LINC00649-202ENST00000400353 ADGRA3Q8IWK6 1321 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 FAM187AA6NFU0 413 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 ERICH4A6NGS2 130 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 CYP26A1O43174 497 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 PHACTR2O75167 634 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 IVLP07476 585 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 TGFB3P10600 412 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 CYP11B1P15538 503 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 EDNRBP24530 442 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 ARL2P36404 184 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 HIRAP54198 1017 aaPredicted RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 MRPS25P82663 173 aaKnown RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 FMO1Q01740 532 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 PRPF4BQ13523 1007 aaKnown RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 MTMR3Q13615 1198 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 VGLL4Q14135 290 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 WDR44Q5JSH3 913 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 PPP1R2P3Q6NXS1 205 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 LRIG3Q6UXM1 1119 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 C15orf39Q6ZRI6 1047 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 CYFIP1Q7L576 1253 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 TAS1R3Q7RTX0 852 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 PALB2Q86YC2 1186 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 EFCAB13Q8IY85 973 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 TSEN2Q8NCE0 465 aaKnown RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 TAS1R2Q8TE23 839 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 SLC7A3Q8WY07 619 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 FAM167AQ96KS9 214 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 RNPC3Q96LT9 517 aaKnown RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 FNBP1Q96RU3 617 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 PCDHB18PQ96TA0 734 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 FAM213AQ9BRX8 229 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 RAB17Q9H0T7 212 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 COG5Q9UP83 839 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 ALG6Q9Y672 507 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 LCTP09848 1927 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms