RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 RIPK1Q13546 671 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 GIT2Q14161 759 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 USH1GQ495M9 461 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 GRIPAP1Q4V328 841 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 CBWD6Q4V339 395 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 CBWD3Q5JTY5 395 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 CBWD5Q5RIA9 395 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 LHX8Q68G74 356 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 FRMD5Q7Z6J6 570 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 UBL4BQ8N7F7 174 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 FBF1Q8TES7 1133 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 NUDCD1Q96RS6 583 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 STMN4Q9H169 189 aaPredicted RBP10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 CARD9Q9H257 536 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 PCIF1Q9H4Z3 704 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 SLCO1B3Q9NPD5 702 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 METTL5Q9NRN9 209 aaKnown RBP10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 NKIRAS1Q9NYS0 192 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 INTUQ9ULD6 942 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 WDR91A4D1P6 747 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 PHF2O75151 1096 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 PIAS1O75925 651 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 CBX6O95503 412 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 LINGO3P0C6S8 592 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 LMNB1P20700 586 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 MGAT5Q09328 741 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 NBPF5PQ86XG9 351 aaPredicted RBP10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 TTC8Q8TAM2 541 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 SEC14L1Q92503 715 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 HEMGNQ9BXL5 484 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 UBE2TQ9NPD8 197 aaPredicted RBP10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 ZFATQ9P243 1243 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 SRP68Q9UHB9 627 aaKnown RBP10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 FAM187AA6NFU0 413 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 BTNL10A8MVZ5 291 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 CALCAP01258 141 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 GNAT1P11488 350 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 AKR1B1P15121 316 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 RPL13P26373 211 aaKnown RBP10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 PTGIRP43119 386 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 POLE2P56282 527 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 MTM1Q13496 603 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 TMED2Q15363 201 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 C2CD6Q53TS8 623 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 DAB2IPQ5VWQ8 1189 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 ECHDC2Q86YB7 292 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 TSC22D3Q99576 134 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 JMJD4Q9H9V9 463 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 ZNF287Q9HBT7 754 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 ZNF652Q9Y2D9 606 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 COL4A1P02462 1669 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 VCAM1P19320 739 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 EPHB2P29323 1055 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 PRKCIP41743 596 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 PPP4CP60510 307 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 DHX34Q14147 1143 aaKnown RBP10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 EDRF1Q3B7T1 1238 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 ZFYVE27Q5T4F4 411 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 DPY19L2P1Q6NXN4 242 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 VSTM1Q6UX27 236 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 NEDD1Q8NHV4 660 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 CYP2W1Q8TAV3 490 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 MYLK2Q9H1R3 596 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 KCNMB3Q9NPA1 279 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 COL5A2P05997 1499 aaPredicted RBP10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 FAM196BA6NMK8 535 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 POC1B-GALNT4F8VUJ3 575 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 ATP9BO43861 1147 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 TMEM253P0C7T8 217 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 ATP4AP20648 1035 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 SSR1P43307 286 aaKnown RBP10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 CLDN10P78369 228 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 SETDB1Q15047 1291 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 CCDC6Q16204 474 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 TBC1D9BQ66K14 1250 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 EGFL6Q8IUX8 553 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 TPH2Q8IWU9 490 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 SH3GL3Q99963 347 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 MYH1P12882 1939 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 MYH4Q9Y623 1939 aa10.57□□□□□ -0.72
PTCHD4-202ENST00000398738 FAM13AO94988 1023 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 RARGP13631 454 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 CHRNA3P32297 505 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 GBP1P32455 592 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 ZNF76P36508 570 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 ADCY8P40145 1251 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 ZNF131P52739 623 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 PPATQ06203 517 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 SLMAPQ14BN4 828 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 CDCA2Q69YH5 1023 aaPredicted RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 TMEM154Q6P9G4 183 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 ARHGAP27Q6ZUM4 889 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 SYCP3Q8IZU3 236 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 SUPT20HQ8NEM7 779 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 SLC30A5Q8TAD4 765 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 DTX3LQ8TDB6 740 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 KAT5Q92993 513 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 RXFP1Q9HBX9 757 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 ARHGEF3Q9NR81 526 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 DLGAP2Q9P1A6 1054 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms