RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 TRADDQ15628 312 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 CDC37Q16543 378 aaPredicted RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 CAVIN4Q5BKX8 364 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 CASKIN2Q8WXE0 1202 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 VPS37BQ9H9H4 285 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 ALG13Q9NP73 1137 aaKnown RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 ZFP69BQ9UJL9 534 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 SNX12Q9UMY4 172 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 SPAG7O75391 227 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 OCM2P0CE71 109 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 OCMP0CE72 109 aaPredicted RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 VAV1P15498 845 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 POLR2FP61218 127 aaKnown RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 PTK2Q05397 1052 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 NOGQ13253 232 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 RILPL1Q5EBL4 403 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 USP50Q70EL3 339 aaPredicted RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 TRAPPC11Q7Z392 1133 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 SLC51AQ86UW1 340 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 RAVER1Q8IY67 606 aaKnown RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 EXOC8Q8IYI6 725 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 RNF169Q8NCN4 708 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.97□□□□□ -0.97
NDE1-202ENST00000396355 AGBL1Q96MI9 1066 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 UBA5Q9GZZ9 404 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 EBF2Q9HAK2 575 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 VAT1LQ9HCJ6 419 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 WBP1LQ9NX94 342 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 SEC63Q9UGP8 760 aaKnown RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 SRPRBQ9Y5M8 271 aaKnown RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 MYH8P13535 1937 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 KIAA1551Q9HCM1 1747 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 RTL9Q8NET4 1388 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 TMEM247A6NEH6 219 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 GIPC1O14908 333 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 ACADSP16219 412 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 MICALL2Q8IY33 904 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 SLC25A41Q8N5S1 370 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 FNBP1Q96RU3 617 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 TSG101Q99816 390 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 FERMT1Q9BQL6 677 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 GOLPH3Q9H4A6 298 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 TRNAU1APQ9NX07 287 aaKnown RBP8.96□□□□□ -0.97
NDE1-202ENST00000396355 THEGQ9P2T0 379 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 CNTNAP1P78357 1384 aa8.96□□□□□ -0.97
NDE1-202ENST00000396355 NMT2O60551 498 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 LMNAP02545 664 aaKnown RBP8.96□□□□□ -0.98
NDE1-202ENST00000396355 GYPCP04921 128 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 KPNB1Q14974 876 aaKnown RBP8.96□□□□□ -0.98
NDE1-202ENST00000396355 CNPY1Q3B7I2 92 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 SAMD7Q7Z3H4 446 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 VPS36Q86VN1 386 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 MAGEC3Q8TD91 643 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 CLIP3Q96DZ5 547 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 NUF2Q9BZD4 464 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 TRIM39Q9HCM9 518 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 PALM3A6NDB9 673 aaPredicted RBP8.96□□□□□ -0.98
NDE1-202ENST00000396355 TAF4O00268 1085 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 CA12O43570 354 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 PEX14O75381 377 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 NPTXRO95502 500 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 CBX6O95503 412 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 ITGA2BP08514 1039 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 BRAFP15056 766 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 ABCB4P21439 1286 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 ATXN3P54252 364 aaPredicted RBP8.96□□□□□ -0.98
NDE1-202ENST00000396355 ASIC1P78348 528 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 CXCL9Q07325 125 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 TROAPQ12815 778 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 DPYDQ12882 1025 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 STK4Q13043 487 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 SF3B3Q15393 1217 aaKnown RBP8.96□□□□□ -0.98
NDE1-202ENST00000396355 TRIM16LQ309B1 348 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 PHF20Q9BVI0 1012 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 ZNF229Q9UJW7 825 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 PCDHGA3Q9Y5H0 932 aa8.96□□□□□ -0.98
NDE1-202ENST00000396355 GOLGA8JA6NMD2 632 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 GOLGA8TH3BQL2 631 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 RAD51CO43502 376 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 BBOX1O75936 387 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 CCDC159P0C7I6 412 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 GOLGA8HP0CJ92 632 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 MARK3P27448 753 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 ZNF394Q53GI3 561 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 KRT80Q6KB66 452 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 PDXDC1Q6P996 788 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 AENQ8WTP8 325 aaKnown RBP8.95□□□□□ -0.98
NDE1-202ENST00000396355 TNFRSF25Q93038 417 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 TRAPPC9Q96Q05 1148 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 STK33Q9BYT3 514 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 GRIP2Q9C0E4 1043 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 MKNK2Q9HBH9 465 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 APPL1Q9UKG1 709 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 STX8Q9UNK0 236 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 PCDHA13Q9Y5I0 950 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 N6AMT1Q9Y5N5 214 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 TRIM75PA6NK02 468 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 E7ENQ6 273 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 PALMO75781 387 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 FGFR4P22455 802 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms