RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 APTXQ7Z2E3 356 aaKnown RBP9.6□□□□□ -0.87
CCR9-203ENST00000395963 ANKRD7Q92527 254 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 NUP58Q9BVL2 599 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 CDT1Q9H211 546 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 MINDY3Q9H8M7 445 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 TOPORSQ9NS56 1045 aaPredicted RBP9.6□□□□□ -0.87
CCR9-203ENST00000395963 SAMSN1Q9NSI8 373 aaKnown RBP9.6□□□□□ -0.87
CCR9-203ENST00000395963 IMPACTQ9P2X3 320 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 CPSF3Q9UKF6 684 aaKnown RBP9.6□□□□□ -0.87
CCR9-203ENST00000395963 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.6□□□□□ -0.87
CCR9-203ENST00000395963 ANKRD63C9JTQ0 380 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 KIAA0355O15063 1070 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 XPOTO43592 962 aaKnown RBP9.6□□□□□ -0.87
CCR9-203ENST00000395963 FAM189A1O60320 539 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 AKAP3O75969 853 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 CHRNA1P02708 482 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 CXCL10P02778 98 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 CLTBP09497 229 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 UBASH3AP57075 661 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 ZNF200P98182 395 aaPredicted RBP9.6□□□□□ -0.87
CCR9-203ENST00000395963 TRAF7Q6Q0C0 670 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 FAM228AQ86W67 206 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 ERGIC2Q96RQ1 377 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 CBWD1Q9BRT8 395 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 NOC4LQ9BVI4 516 aaKnown RBP9.6□□□□□ -0.87
CCR9-203ENST00000395963 ELAC1Q9H777 363 aaKnown RBP9.6□□□□□ -0.87
CCR9-203ENST00000395963 TRMT13Q9NUP7 481 aaKnown RBP9.6□□□□□ -0.87
CCR9-203ENST00000395963 TBX21Q9UL17 535 aa9.6□□□□□ -0.87
CCR9-203ENST00000395963 ZC3H11AO75152 810 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCR9-203ENST00000395963 AFPP02771 609 aaKnown RBP9.59□□□□□ -0.87
CCR9-203ENST00000395963 CYP24A1Q07973 514 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 NR1I3Q14994 352 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 CEP135Q66GS9 1140 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 WDR49Q8IV35 697 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 PGBD4Q96DM1 585 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 TCHPQ9BT92 498 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 CALCOCO1Q9P1Z2 691 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 FBXL5Q9UKA1 691 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 C2CD2Q9Y426 696 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCR9-203ENST00000395963 INPPL1O15357 1258 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 HOXA11P31270 313 aaPredicted RBP9.59□□□□□ -0.87
CCR9-203ENST00000395963 CYP2J2P51589 502 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 VAMP7P51809 220 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 ZNF75DP51815 510 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 YARSP54577 528 aaKnown RBP9.59□□□□□ -0.87
CCR9-203ENST00000395963 DSC3Q14574 896 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 LPIN1Q14693 890 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 ZNF618Q5T7W0 954 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 MRPL10Q7Z7H8 261 aaKnown RBP9.59□□□□□ -0.87
CCR9-203ENST00000395963 SEPT8Q92599 483 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 SLC35C1Q96A29 364 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 CGRRF1Q99675 332 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 TRIM5Q9C035 493 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 NDST4Q9H3R1 872 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 POLD4Q9HCU8 107 aa9.59□□□□□ -0.87
CCR9-203ENST00000395963 NOC2LQ9Y3T9 749 aaKnown RBP9.59□□□□□ -0.87
CCR9-203ENST00000395963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCR9-203ENST00000395963 CLIC2O15247 247 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 EOMESO95936 686 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 MATR3P43243 847 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCR9-203ENST00000395963 FAAP100Q0VG06 881 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 XKR4Q5GH76 650 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 ZNF771Q7L3S4 317 aaPredicted RBP9.58□□□□□ -0.88
CCR9-203ENST00000395963 PARD3BQ8TEW8 1205 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 CACTINQ8WUQ7 758 aaKnown RBP9.58□□□□□ -0.88
CCR9-203ENST00000395963 FNBP1Q96RU3 617 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 HTATIP2Q9BUP3 242 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 TRPV6Q9H1D0 765 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 HIPK3Q9H422 1215 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 RPF1Q9H9Y2 349 aaKnown RBP9.58□□□□□ -0.88
CCR9-203ENST00000395963 TMEM8AQ9HCN3 771 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 RBAKQ9NYW8 714 aaPredicted RBP9.58□□□□□ -0.88
CCR9-203ENST00000395963 ST3GAL5Q9UNP4 418 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 PIN4Q9Y237 131 aaKnown RBP9.58□□□□□ -0.88
CCR9-203ENST00000395963 GIT1Q9Y2X7 761 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 COQ4Q9Y3A0 265 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 CTIFO43310 598 aaKnown RBP9.58□□□□□ -0.88
CCR9-203ENST00000395963 HOXA2O43364 376 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 IQCF3P0C7M6 154 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 CYP3A5P20815 502 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 TRIM60Q495X7 471 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 PLEKHG4Q58EX7 1191 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 TMEM40Q8WWA1 233 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 TAF4BQ92750 862 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 PAWRQ96IZ0 340 aaKnown RBP9.58□□□□□ -0.88
CCR9-203ENST00000395963 ACAP3Q96P50 834 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 TRIM6Q9C030 488 aaPredicted RBP9.58□□□□□ -0.88
CCR9-203ENST00000395963 NUCKS1Q9H1E3 243 aaKnown RBP9.58□□□□□ -0.88
CCR9-203ENST00000395963 PLCB1Q9NQ66 1216 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 RGS18Q9NS28 235 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 ANKFY1Q9P2R3 1169 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 MYO6Q9UM54 1294 aa9.58□□□□□ -0.88
CCR9-203ENST00000395963 TRIP12Q14669 1992 aaPredicted RBP9.58□□□□□ -0.88
CCR9-203ENST00000395963 STAU1O95793 577 aaKnown RBP9.57□□□□□ -0.88
CCR9-203ENST00000395963 EDN1P05305 212 aa9.57□□□□□ -0.88
CCR9-203ENST00000395963 PTMAP06454 111 aaKnown RBP9.57□□□□□ -0.88
CCR9-203ENST00000395963 TPM1P09493 284 aa9.57□□□□□ -0.88
CCR9-203ENST00000395963 ATP1A3P13637 1013 aa9.57□□□□□ -0.88
CCR9-203ENST00000395963 PBX1P40424 430 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms