RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 SPTLC1O15269 473 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 B4GALT5O43286 388 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 LAMTOR5O43504 91 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 CDC45O75419 566 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 HSPA4P34932 840 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 CREMQ03060 361 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
SNCA-205ENST00000394991 GRIK3Q13003 919 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 CAPSQ13938 189 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 UBXN2BQ14CS0 331 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 PCBP1Q15365 356 aaKnown RBP eCLIP17.61■□□□□ 0.41
SNCA-205ENST00000394991 EPHA7Q15375 998 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 XKR9Q5GH70 373 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 TRIM22Q8IYM9 498 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 ITFG1Q8TB96 612 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 HAS1Q92839 578 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 FGF13Q92913 245 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 DYDC2Q96IM9 177 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 CLSTN3Q9BQT9 956 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 BCO2Q9BYV7 579 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 SLKQ9H2G2 1235 aaPredicted RBP17.61■□□□□ 0.41
SNCA-205ENST00000394991 KLK14Q9P0G3 267 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 CHD8Q9HCK8 2581 aa17.61■□□□□ 0.41
SNCA-205ENST00000394991 F5P12259 2224 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 CCL16O15467 120 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 ADAM12O43184 909 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 NPTXRO95502 500 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 HNRNPA1P09651 372 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNCA-205ENST00000394991 CD72P21854 359 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 PRKCQQ04759 706 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 CSTF1Q05048 431 aaKnown RBP17.6■□□□□ 0.41
SNCA-205ENST00000394991 CTTNQ14247 550 aaKnown RBP17.6■□□□□ 0.41
SNCA-205ENST00000394991 SLC44A4Q53GD3 710 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 MTSS1LQ765P7 747 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 KRT25Q7Z3Z0 450 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 HASPINQ8TF76 798 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 TRIM6Q9C030 488 aaPredicted RBP17.6■□□□□ 0.41
SNCA-205ENST00000394991 LTB4R2Q9NPC1 389 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 ZMYM2Q9UBW7 1377 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 COL4A2P08572 1712 aa17.6■□□□□ 0.41
SNCA-205ENST00000394991 SF3B1O75533 1304 aaKnown RBP eCLIP17.59■□□□□ 0.413e-6■■■■■ 137.9
SNCA-205ENST00000394991 FAM170BA6NMN3 283 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 TADA2AO75478 443 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 DEXIO95424 95 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 C8AP07357 584 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 ATXN1P54253 815 aaKnown RBP17.59■□□□□ 0.41
SNCA-205ENST00000394991 CYP4A11Q02928 519 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 SPIRE1Q08AE8 756 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 TOB2Q14106 344 aaPredicted RBP17.59■□□□□ 0.41
SNCA-205ENST00000394991 HSP90AA2PQ14568 343 aaPredicted RBP17.59■□□□□ 0.41
SNCA-205ENST00000394991 MXD4Q14582 209 aaPredicted RBP17.59■□□□□ 0.41
SNCA-205ENST00000394991 NCAPH2Q6IBW4 605 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 OTUD6AQ7L8S5 288 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 ZBTB44Q8NCP5 570 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 LNX1Q8TBB1 728 aaPredicted RBP17.59■□□□□ 0.41
SNCA-205ENST00000394991 PIK3R5Q8WYR1 880 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 NELL1Q92832 810 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 KXD1Q9BQD3 176 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 OSBPL6Q9BZF3 934 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 KCNJ14Q9UNX9 436 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 SMG5Q9UPR3 1016 aaKnown RBP17.59■□□□□ 0.41
SNCA-205ENST00000394991 PCDHGA2Q9Y5H1 932 aa17.59■□□□□ 0.41
SNCA-205ENST00000394991 LILRB5O75023 590 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 KIF4AO95239 1232 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 TARSP26639 723 aaKnown RBP17.58■□□□□ 0.4
SNCA-205ENST00000394991 HOXA9P31269 272 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 POU5F1BQ06416 359 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 PSMD5Q16401 504 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 PPM1LQ5SGD2 360 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 LIN9Q5TKA1 542 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 PPP4R3AQ6IN85 833 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 GALNT17Q6IS24 598 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 NEK8Q86SG6 692 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 HACE1Q8IYU2 909 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 TTPALQ9BTX7 342 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 PHF20Q9BVI0 1012 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 EPC1Q9H2F5 836 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 ZSWIM4Q9H7M6 989 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 HCFC1R1Q9NWW0 138 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 PARP2Q9UGN5 583 aa17.58■□□□□ 0.4
SNCA-205ENST00000394991 RALGAPA1Q6GYQ0 2036 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 TICRRQ7Z2Z1 1910 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 CASTOR2A6NHX0 329 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 GCFC2P16383 781 aaKnown RBP17.57■□□□□ 0.4
SNCA-205ENST00000394991 GLRA2P23416 452 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 ARL2P36404 184 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 NCBP1Q09161 790 aaKnown RBP17.57■□□□□ 0.4
SNCA-205ENST00000394991 TUSC3Q13454 348 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 TFDP1Q14186 410 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 FAM171A1Q5VUB5 890 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 SLC27A1Q6PCB7 646 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 TSSK4Q6SA08 328 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 RSPO2Q6UXX9 243 aaPredicted RBP17.57■□□□□ 0.4
SNCA-205ENST00000394991 NPAS3Q8IXF0 933 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 ATRIPQ8WXE1 791 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 CLDN23Q96B33 292 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 BORCS6Q96GS4 357 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 CXCL16Q9H2A7 254 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 ZSCAN32Q9NX65 697 aa17.57■□□□□ 0.4
SNCA-205ENST00000394991 POLIQ9UNA4 740 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms