RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 BPIFB4P59827 614 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 GPS1Q13098 491 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 TAF11Q15544 211 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 DAB2IPQ5VWQ8 1189 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 ZNF572Q7Z3I7 529 aaPredicted RBP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 SCYL3Q8IZE3 742 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 ZKSCAN4Q969J2 545 aaPredicted RBP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 ACSF2Q96CM8 615 aaPredicted RBP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 RBM15Q96T37 977 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 C4AP0C0L4 1744 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 C4BP0C0L5 1744 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 CES2O00748 559 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 SNHG28P0DPA3 235 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 RARGP13631 454 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 CNGA1P29973 690 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 MAN1A1P33908 653 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 MARSP56192 900 aaKnown RBP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 MOXD1Q6UVY6 613 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 C1orf186Q6ZWK4 172 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 TAS1R2Q8TE23 839 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 P3H4Q92791 437 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 ZNF668Q96K58 619 aaPredicted RBP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 ABCF3Q9NUQ8 709 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 RALAP11233 206 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 DNAJC3Q13217 504 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 ANKMY2Q8IV38 441 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 GABBR1Q9UBS5 961 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 NXF1Q9UBU9 619 aaKnown RBP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 MYH13Q9UKX3 1938 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 A0A0G2JND7 137 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 TCRBV7S2A1N4TA0A589 114 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 ZBTB33Q86T24 672 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 ZBED8Q8IZ13 594 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 BBOF1Q8ND07 529 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 ATL2Q8NHH9 583 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 SLC5A5Q92911 643 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 CFAP57Q96MR6 1250 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 RAB3IPQ96QF0 476 aaPredicted RBP17.19■□□□□ 0.34
PCDH1-203ENST00000394536 ZWILCHQ9H900 591 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 ZHX2Q9Y6X8 837 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 MYH7P12883 1935 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 ROBO3Q96MS0 1386 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 SWSAP1Q6NVH7 229 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 WDR18Q9BV38 432 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 MRPL47Q9HD33 250 aaKnown RBP17.19■□□□□ 0.34
PCDH1-203ENST00000394536 CASZ1Q86V15 1759 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 RIPK2O43353 540 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 BASP1P80723 227 aaKnown RBP17.19■□□□□ 0.34
PCDH1-203ENST00000394536 P3H1Q32P28 736 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 NOP9Q86U38 636 aaKnown RBP17.19■□□□□ 0.34
PCDH1-203ENST00000394536 NSMCE1Q8WV22 266 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 KLF6Q99612 283 aaPredicted RBP17.19■□□□□ 0.34
PCDH1-203ENST00000394536 MYH15Q9Y2K3 1946 aa17.19■□□□□ 0.34
PCDH1-203ENST00000394536 CYP11B1P15538 503 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 RFX1P22670 979 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 RRM1P23921 792 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 YWHAGP61981 247 aaKnown RBP eCLIP17.18■□□□□ 0.34
PCDH1-203ENST00000394536 MUM1Q2TAK8 710 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 HYIQ5T013 277 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 DUPD1Q68J44 220 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 GBP7Q8N8V2 638 aaPredicted RBP17.18■□□□□ 0.34
PCDH1-203ENST00000394536 LRRC37BQ96QE4 947 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 COG5Q9UP83 839 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 ARL2BPQ9Y2Y0 163 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 PCDHA2Q9Y5H9 948 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 RASSF2P50749 326 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 ERMARDQ5T6L9 678 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 DNAJC24Q6P3W2 148 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 SCYL2Q6P3W7 929 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 CPNE8Q86YQ8 564 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 CALN1Q9BXU9 219 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 CPP00450 1065 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 DRD4P21917 467 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 CDC25CP30307 473 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 C6orf163Q5TEZ5 329 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 TRMT10CQ7L0Y3 403 aaKnown RBP17.18■□□□□ 0.34
PCDH1-203ENST00000394536 COL23A1Q86Y22 540 aaPredicted RBP17.18■□□□□ 0.34
PCDH1-203ENST00000394536 LMNTD2Q8IXW0 634 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 CHST7Q9NS84 486 aa17.18■□□□□ 0.34
PCDH1-203ENST00000394536 K7ERI5 159 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 GGPS1O95749 300 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 KRT10P13645 584 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 ITIH2P19823 946 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 CLK2P49760 499 aaKnown RBP17.17■□□□□ 0.34
PCDH1-203ENST00000394536 TFAMQ00059 246 aaKnown RBP17.17■□□□□ 0.34
PCDH1-203ENST00000394536 DDR1Q08345 913 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 ALCAMQ13740 583 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 VPS72Q15906 364 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 PRUNE1Q86TP1 453 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 PYROXD1Q8WU10 500 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 ERP27Q96DN0 273 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 STAMBPL1Q96FJ0 436 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 UVRAGQ9P2Y5 699 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 CDH16O75309 829 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 PPFIA2O75334 1257 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 ARSEP51690 589 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 SPARCL1Q14515 664 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms