RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 ACSL3O95573 720 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 C6orf222P0C671 652 aaPredicted RBP15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 BACE1P56817 501 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 SF3A3Q12874 501 aaKnown RBP eCLIP15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 C1orf228Q6PIY5 440 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 AGBL1Q96MI9 1066 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 MED15Q96RN5 788 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 A0A087WUV0 522 aaPredicted RBP15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 CYP26A1O43174 497 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 HUNKP57058 714 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 RAD51Q06609 339 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 RCOR2Q8IZ40 523 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 GDAP1Q8TB36 358 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 IFT43Q96FT9 208 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 TAF1DQ9H5J8 278 aaPredicted RBP15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 ACTR5Q9H9F9 607 aaPredicted RBP15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 PLAAQ9Y263 795 aa15.31■□□□□ 0.04
PPARGC1B-203ENST00000394320 NPHP3-ACAD11A0A0J9YXS1 232 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 TOM1L1O75674 476 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 ADORA2BP29275 332 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 SEC23AQ15436 765 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 ATF7IP2Q5U623 682 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 FAM163AQ96GL9 167 aaPredicted RBP15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 SNF8Q96H20 258 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 TBK1Q9UHD2 729 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 SYNPO2Q9UMS6 1093 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 SALL3Q9BXA9 1300 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 DPYSL4O14531 572 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 CPB1P15086 417 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 ACADSBP45954 432 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 HSD17B4P51659 736 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 FMR1Q06787 632 aaKnown RBP eCLIP15.3■□□□□ 0.041e-9■■■■■ 34
PPARGC1B-203ENST00000394320 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 FGFR1OP2Q9NVK5 253 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 PCSK1NQ9UHG2 260 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 MROH1Q8NDA8 1641 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 MX2P20592 715 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 PNPLA4P41247 253 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 ZKSCAN8Q15776 578 aaPredicted RBP15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 MYLK4Q86YV6 388 aaPredicted RBP15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 ATP11CQ8NB49 1132 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 ERGIC2Q96RQ1 377 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 PXDNQ92626 1479 aa15.3■□□□□ 0.04
PPARGC1B-203ENST00000394320 RARBP10826 455 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 PCSK1P29120 753 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 SLC26A2P50443 739 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 RASGRP2Q7LDG7 609 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 WDR75Q8IWA0 830 aaKnown RBP15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 PPME1Q9Y570 386 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 KIF1AQ12756 1690 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 PNMA6AP0CW24 399 aaPredicted RBP15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 SKIP12755 728 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 PIGHQ14442 188 aaPredicted RBP15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 SV2CQ496J9 727 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 FKBP1CQ5VVH2 108 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 CD302Q8IX05 232 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 AGXT2Q9BYV1 514 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 DHX35Q9H5Z1 703 aaKnown RBP15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 CFAP69A5D8W1 941 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 MSH4O15457 936 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 CYP2C9P11712 490 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 HOXA10P31260 410 aaPredicted RBP15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 DRP2Q13474 957 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 TSTA3Q13630 321 aaPredicted RBP15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 ZNF484Q5JVG2 852 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 NFRKBQ6P4R8 1299 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 FBXO38Q6PIJ6 1188 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 CRLF3Q8IUI8 442 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 ENGASEQ8NFI3 743 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 PPP1R2P1Q96PQ5 205 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 IL25Q9H293 177 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 INTUQ9ULD6 942 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 PPP1R9AQ9ULJ8 1098 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 PSMD3O43242 534 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 KRT14P02533 472 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 CLTAP09496 248 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 CLNS1AP54105 237 aaKnown RBP15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 PMS2P54278 862 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 CDH6P55285 790 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 IFT88Q13099 833 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 NAB2Q15742 525 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 DCAF4L1Q3SXM0 396 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 CATSPER3Q86XQ3 398 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 RBBP8NLQ8NC74 664 aaPredicted RBP15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 ATL2Q8NHH9 583 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 AFG1LQ8WV93 481 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 FOXP3Q9BZS1 431 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 RIOX1Q9H6W3 641 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 SNX12Q9UMY4 172 aa15.29■□□□□ 0.04
PPARGC1B-203ENST00000394320 CTIFO43310 598 aaKnown RBP15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 SLC4A1P02730 911 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 MYBP10242 640 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 CCDC137Q6PK04 289 aaKnown RBP15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 EFHBQ8N7U6 833 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 TAAR1Q96RJ0 339 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 TAF6LQ9Y6J9 622 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 SMAPO00193 183 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 CREB3O43889 395 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms