RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 ANKS6Q68DC2 871 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 EFCAB12Q6NXP0 572 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 PQLC1Q8N2U9 271 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 REPS2Q8NFH8 660 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 ZFP28Q8NHY6 868 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 JADE3Q92613 823 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 MTMR8Q96EF0 704 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 CYFIP2Q96F07 1278 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 SLC2A13Q96QE2 648 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 DCLRE1CQ96SD1 692 aaKnown RBP4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 UHRF1Q96T88 793 aaPredicted RBP4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 SPON1Q9HCB6 807 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 LANCL2Q9NS86 450 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 MOCS1Q9NZB8 636 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 SPEF1Q9Y4P9 236 aa4.92□□□□□ -1.62
SNORA40.3-201ENST00000390964 ANKRD62A6NC57 917 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 KLHL33A6NCF5 533 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 CXorf49A8MYA2 514 aaPredicted RBP4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 DIRC3C9JPN6 131 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 FZD9O00144 591 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 PPFIA4O75335 1185 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 ZNF202O95125 648 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 MT-CO1P00395 513 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 FSHBP01225 129 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 MYBL2P10244 700 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 MAKP20794 623 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 IBSPP21815 317 aaPredicted RBP4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 MCM7P33993 719 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 CLRN1P58418 232 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 EVA1CP58658 441 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 FAM50AQ14320 339 aaKnown RBP4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 SEPT2Q15019 361 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 CSRP2Q16527 193 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 FNDC7Q5VTL7 733 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 SLC16A11Q8NCK7 471 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 CASKIN2Q8WXE0 1202 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 TFAP2CQ92754 450 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 FUBP3Q96I24 572 aaKnown RBP eCLIP4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 SLC13A1Q9BZW2 595 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 CCDC8Q9H0W5 538 aaPredicted RBP4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 TMEM140Q9NV12 185 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 FAM30AQ9NZY2 134 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 SRRDQ9UH36 339 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 SORCS3Q9UPU3 1222 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 DNM3Q9UQ16 869 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 SIK3Q9Y2K2 1263 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 MRFAP1Q9Y605 127 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 HS3ST3A1Q9Y663 406 aa4.91□□□□□ -1.62
SNORA40.3-201ENST00000390964 AKAP8O43823 692 aaKnown RBP4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 PCDHGA12O60330 932 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 FAM20BO75063 409 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 NDUFS2O75306 463 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 PTGS2P35354 604 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 SLC6A9P48067 706 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 SLC16A1P53985 500 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 ABHD18Q0P651 414 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 ABCB5Q2M3G0 1257 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 RRP12Q5JTH9 1297 aaKnown RBP4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 IGFL4Q6B9Z1 124 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 OTUD7BQ6GQQ9 843 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 FAM177A1Q8N128 213 aaPredicted RBP4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 ZNF276Q8N554 614 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 SLC35B2Q8TB61 432 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 ZNF483Q8TF39 744 aaPredicted RBP4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 SLC25A43Q8WUT9 341 aaPredicted RBP4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 SENP6Q9GZR1 1112 aaPredicted RBP4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 MANSC1Q9H8J5 431 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 SAP30BPQ9UHR5 308 aaKnown RBP4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 EIF2B4Q9UI10 523 aaKnown RBP4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 NOP58Q9Y2X3 529 aaKnown RBP4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 PCDHGA9Q9Y5G4 932 aaKnown RBP4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 PCDHGA8Q9Y5G5 932 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 PCDHGA7Q9Y5G6 932 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 PCDHGA6Q9Y5G7 932 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 PCDHGA3Q9Y5H0 932 aa4.9□□□□□ -1.63
SNORA40.3-201ENST00000390964 TEX33O43247 280 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 SCAF4O95104 1147 aaKnown RBP4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 APOBEC3AP31941 199 aaPredicted RBP4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 ACAP2Q15057 778 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 PCBP2Q15366 365 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 ATXN7L2Q5T6C5 722 aaPredicted RBP4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 AFMIDQ63HM1 303 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 SYT12Q8IV01 421 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 AMER2Q8N7J2 671 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 PPM1NQ8N819 430 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 OR10H5Q8NGA6 315 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 OR2I1PQ8NGU4 316 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 CPT1CQ8TCG5 803 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 NRG4Q8WWG1 115 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 HAS1Q92839 578 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 LENG9Q96B70 501 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 GPATCH3Q96I76 525 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 FAM193BQ96PV7 902 aaPredicted RBP4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 C7orf25Q9BPX7 421 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 SLC46A2Q9BY10 475 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 ASPSCR1Q9BZE9 553 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 SCAND2PQ9GZW5 306 aaPredicted RBP4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 SLC2A4RGQ9NR83 387 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 HOMER2Q9NSB8 354 aa4.89□□□□□ -1.63
SNORA40.3-201ENST00000390964 GPRC5BQ9NZH0 403 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms