RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 USP17L22D6RA61 530 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 USP17L17D6RBQ6 530 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 USP17L19D6RCP7 530 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 USP17L20D6RJB6 530 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 CBX6O95503 412 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 NTSR2O95665 410 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 LDOC1O95751 146 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 CER1O95813 267 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 MT-CO3P00414 261 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 PIGRP01833 764 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 F11P03951 625 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 TP53P04637 393 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 CKMP06732 381 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 PGK2P07205 417 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 CSF1RP07333 972 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 MYL3P08590 195 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 RSPH10BP0C881 870 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 SFPQP23246 707 aaKnown RBP eCLIP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 CHMLP26374 656 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 HOXC12P31275 282 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 MATKP42679 507 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 KPNA1P52294 538 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 NKX6-1P78426 367 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 E2F1Q01094 437 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 USP17L24Q0WX57 530 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 ST3GAL1Q11201 340 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 TCP10Q12799 353 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 GIT2Q14161 759 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 PLS1Q14651 629 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 GRM4Q14833 912 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 PCOLCEQ15113 449 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 NR6A1Q15406 480 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 SYCP1Q15431 976 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 KRTAP20-1Q3LI63 56 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 PAN2Q504Q3 1202 aaKnown RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 BRDTQ58F21 947 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 C10orf62Q5T681 223 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 ZNF618Q5T7W0 954 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 IL27RAQ6UWB1 636 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 KIF6Q6ZMV9 814 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 BNC2Q6ZN30 1099 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 DBX2Q6ZNG2 339 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 GET4Q7L5D6 327 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 KANSL1Q7Z3B3 1105 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 C14orf80Q86SX3 495 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 CCDC84Q86UT8 332 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 ZSCAN29Q8IWY8 852 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 PARP9Q8IXQ6 854 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 SHISA5Q8N114 240 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 ARL14Q8N4G2 192 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 CERS5Q8N5B7 392 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 DCBLD1Q8N8Z6 715 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 RDH13Q8NBN7 331 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 NUP43Q8NFH3 380 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 SMG7Q92540 1137 aaKnown RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 WASF1Q92558 559 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 NRGNQ92686 78 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 IRF7Q92985 503 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 SLC46A1Q96NT5 459 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 CATSPER2Q96P56 530 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 TBX15Q96SF7 602 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 SPOCK3Q9BQ16 436 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 MTG1Q9BT17 334 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 STK31Q9BXU1 1019 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 C12orf65Q9H3J6 166 aaKnown RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 ABHD16BQ9H3Z7 469 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 FAM124BQ9H5Z6 455 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 ZBTB20Q9HC78 741 aaPredicted RBP1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 NEUROD4Q9HD90 331 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 SMC4Q9NTJ3 1288 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 STMN3Q9NZ72 180 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 GMIPQ9P107 970 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 ADGRE2Q9UHX3 823 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 ST6GALNAC2Q9UJ37 374 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 CROTQ9UKG9 612 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 CDH7Q9ULB5 785 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 PLA2G2DQ9UNK4 145 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 PCDHGB7Q9Y5F8 929 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 PCDHGA4Q9Y5G9 962 aa1.38□□□□□ -2.19
RNU6-42P-201ENST00000384165 WNK2Q9Y3S1 2297 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 TLCD2A6NGC4 264 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 METTL12A8MUP2 240 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 MKRN2OSH3BPM6 223 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 J3QL48 77 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 ENC1O14682 589 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 SCAMP1O15126 338 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 CTAGE5O15320 804 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 TMPRSS2O15393 492 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 AP5Z1O43299 807 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 TSPAN3O60637 253 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 KPNA6O60684 536 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 CILPO75339 1184 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 CNMDO75829 334 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 CNTN5O94779 1100 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 SNAI1O95863 264 aaPredicted RBP1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 EFEMP2O95967 443 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 STAG3L1P0CL83 205 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 PTPN2P17706 415 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 BCKDHBP21953 392 aa1.37□□□□□ -2.19
RNU6-42P-201ENST00000384165 KLRC2P26717 231 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms