RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 EPC1Q9H2F5 836 aa21.45■■□□□ 1.02
PDLIM5-205ENST00000380180 ZSWIM8A7E2V4 1837 aa21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 TOM1L1O75674 476 aa21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 HARSP12081 509 aaKnown RBP21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 USP8P40818 1118 aa21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 TFDP1Q14186 410 aa21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 HSP90AA2PQ14568 343 aaPredicted RBP21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 ZBTB33Q86T24 672 aa21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 SAPCD2Q86UD0 394 aa21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 TATDN2Q93075 761 aa21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 TCHPQ9BT92 498 aa21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 SNX12Q9UMY4 172 aa21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 PTPRJQ12913 1337 aa21.44■■□□□ 1.02
PDLIM5-205ENST00000380180 CTAGE15A4D2H0 777 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 PALMO75781 387 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 C4BPAP04003 597 aaKnown RBP21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 H2AFZP0C0S5 128 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 CTAGE8P0CG41 777 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 ZACNQ401N2 412 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 MORN1Q5T089 497 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 IQSEC1Q6DN90 963 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 RGMBQ6NW40 437 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 H2AFVQ71UI9 128 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 MTERF4Q7Z6M4 381 aaKnown RBP21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 CTAGE6Q86UF2 777 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 CTAGE4Q8IX94 777 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 FAM71AQ8IYT1 594 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 RABGGTAQ92696 567 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 AGPAT1Q99943 283 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 PI4K2AQ9BTU6 479 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 ATP8B3O60423 1300 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 H3BRB1 525 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 ZNF185O15231 689 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 ASAP2O43150 1006 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 FBXO38Q6PIJ6 1188 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 SLC20A1Q8WUM9 679 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 SHC3Q92529 594 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 CAPZA3Q96KX2 299 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 TUT1Q9H6E5 874 aaKnown RBP21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 INTUQ9ULD6 942 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 PCDHGC5Q9Y5F6 944 aa21.43■■□□□ 1.02
PDLIM5-205ENST00000380180 ANK1P16157 1881 aa21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 ADCY6O43306 1168 aa21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 MMP3P08254 477 aa21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 PRLRP16471 622 aa21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 GALCP54803 685 aa21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 TDRD10Q5VZ19 366 aaKnown RBP21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 MSL3Q8N5Y2 521 aaKnown RBP21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 GPR161Q8N6U8 529 aaKnown RBP21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 OR6J1Q8NGC5 347 aa21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 FZD8Q9H461 694 aa21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 ZCCHC17Q9NP64 241 aaKnown RBP21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 CNTNAP2Q9UHC6 1331 aa21.42■■□□□ 1.02
PDLIM5-205ENST00000380180 TMCO5BA8MYB1 307 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 INO80B-WBP1J3KQ70 363 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 MAGEB2O15479 319 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 NCK2O43639 380 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 FAM189A1O60320 539 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 ZC3H11AO75152 810 aaKnown RBP eCLIP21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 ZSCAN20P17040 1043 aaPredicted RBP21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 TNFSF9P41273 254 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 PTENP60484 403 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 MAP2K5Q13163 448 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 PRAMEF19Q5SWL8 479 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 MMS19Q96T76 1030 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 TLR10Q9BXR5 811 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 INO80BQ9C086 356 aaPredicted RBP21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 SEPT11Q9NVA2 429 aaKnown RBP21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 ACKR2O00590 384 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 CYP26A1O43174 497 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 SGPL1O95470 568 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 PALB2Q86YC2 1186 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 IFNL1Q8IU54 200 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 MAP7D2Q96T17 732 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 MINDY3Q9H8M7 445 aa21.41■■□□□ 1.02
PDLIM5-205ENST00000380180 ABLIM1O14639 778 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 VNN1O95497 513 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 HLA-DRAP01903 254 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 HOXD8P13378 290 aaPredicted RBP21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 H2AFXP16104 143 aaPredicted RBP21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 NOP2P46087 812 aaKnown RBP21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 TNFAIP2Q03169 654 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 MCL1Q07820 350 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 BIRC3Q13489 604 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 NFRKBQ6P4R8 1299 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 LINC01465Q8N7H1 131 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 OSBPL9Q96SU4 736 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 CGRRF1Q99675 332 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 TAS2R14Q9NYV8 317 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 COL1A2P08123 1366 aa21.4■■□□□ 1.02
PDLIM5-205ENST00000380180 GRID2IPA4D2P6 1211 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 OGTO15294 1046 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 B4GALT5O43286 388 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 IQCF3P0C7M6 154 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 TUBB4BP68371 445 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 GCNT1Q02742 428 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 MBTD1Q05BQ5 628 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 DGKDQ16760 1214 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 C17orf99Q6UX52 265 aa21.39■■□□□ 1.02
PDLIM5-205ENST00000380180 TSHZ1Q6ZSZ6 1077 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms