RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 CD4P01730 458 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 PDGFRBP09619 1106 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 OCM2P0CE71 109 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 OCMP0CE72 109 aaPredicted RBP11.58□□□□□ -0.56
LINC00654-201ENST00000379053 ZFXP17010 805 aaPredicted RBP11.58□□□□□ -0.56
LINC00654-201ENST00000379053 PEX19P40855 299 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 TMPRSS15P98073 1019 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 ASAP3Q8TDY4 903 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 SLC26A7Q8TE54 656 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 UPF3AQ9H1J1 476 aaKnown RBP11.58□□□□□ -0.56
LINC00654-201ENST00000379053 SENP1Q9P0U3 644 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 PRR12Q9ULL5 1215 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 LRRC53A6NM62 1247 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 MYBL1P10243 752 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 GNL1P36915 607 aaPredicted RBP11.58□□□□□ -0.56
LINC00654-201ENST00000379053 THPOP40225 353 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 COPS2P61201 443 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 CUL4AQ13619 759 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 ARHGEF7Q14155 803 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 SPATS2Q86XZ4 545 aaKnown RBP11.58□□□□□ -0.56
LINC00654-201ENST00000379053 PDE11AQ9HCR9 933 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 AIPL1Q9NZN9 384 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 PODXLO00592 558 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 SYF2O95926 243 aaKnown RBP11.58□□□□□ -0.56
LINC00654-201ENST00000379053 MYBP10242 640 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 CDC27P30260 824 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 NOGQ13253 232 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 BFSP2Q13515 415 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 DGKZQ13574 1117 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 EMC2Q15006 297 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 SMAD1Q15797 465 aaKnown RBP11.58□□□□□ -0.56
LINC00654-201ENST00000379053 IL31Q6EBC2 164 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 CRLF3Q8IUI8 442 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 TIPINQ9BVW5 301 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 TEX12Q9BXU0 123 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 C17orf102A2RUQ5 167 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 FKTNO75072 461 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 RAG1P15918 1043 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 ACOT2P49753 483 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 SIRT2Q8IXJ6 389 aa11.58□□□□□ -0.56
LINC00654-201ENST00000379053 RRN3P2A6NIE6 340 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 ASAP2O43150 1006 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 PALMO75781 387 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 NMT1P30419 496 aaKnown RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 PRCPP42785 496 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 LIG3P49916 1009 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 ATG4CQ96DT6 458 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 PANX2Q96RD6 677 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 DDX56Q9NY93 547 aaKnown RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 MAP4P27816 1152 aaKnown RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 LAMC2Q13753 1193 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 RASSF3Q86WH2 238 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 RNF135Q8IUD6 432 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 MFN1Q8IWA4 741 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 SERPINI1Q99574 410 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 FTLP02792 175 aaPredicted RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 PYGLP06737 847 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 PCSK1P29120 753 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 RFC5P40937 340 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 INHBEP58166 350 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 EFCAB12Q6NXP0 572 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 RPAINQ86UA6 219 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 SNX24Q9Y343 169 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 L3MBTL1Q9Y468 752 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 LGALS16A8MUM7 142 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 RSPH10B2B2RC85 870 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 ZNF500O60304 480 aaPredicted RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 SUPT20HL2P0C7V6 817 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 RSPH10BP0C881 870 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 RGS7P49802 495 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 APLP1P51693 650 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 CCDC15Q0P6D6 951 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 TOB2Q14106 344 aaPredicted RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 STILQ15468 1287 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 TRIM59Q8IWR1 403 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 FOPNLQ96NB1 174 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 PPP1R9AQ9ULJ8 1098 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 ATP11BQ9Y2G3 1177 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 HBP1O60381 514 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 MFAP3LO75121 409 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 EEF1B2P24534 225 aaKnown RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 PRKCEQ02156 737 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 PDCD2Q16342 344 aaPredicted RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 ZNF34Q8IZ26 560 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 NR1H4Q96RI1 486 aaPredicted RBP11.57□□□□□ -0.56
LINC00654-201ENST00000379053 TSSK1BQ9BXA7 367 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 TRIM15Q9C019 465 aa11.57□□□□□ -0.56
LINC00654-201ENST00000379053 PTPRMP28827 1452 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 SPATA31A5Q5VU36 1347 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 SPATA31A7Q8IWB4 1347 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 CCDC188H7C350 402 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 MAP3K13O43283 966 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 ATP1A3P13637 1013 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 CHRNA3P32297 505 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 WDR75Q8IWA0 830 aaKnown RBP11.56□□□□□ -0.56
LINC00654-201ENST00000379053 LRRC71Q8N4P6 559 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 PPM1NQ8N819 430 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms