RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 LILRA6Q6PI73 481 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 CYP26C1Q6V0L0 522 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 SPATA31D4Q6ZUB0 917 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 RSAD2Q8WXG1 361 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 RABGGTAQ92696 567 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 MYADMQ96S97 322 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 PAAF1Q9BRP4 392 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 TRIM6Q9C030 488 aaPredicted RBP21.21■□□□□ 0.99
CBWD3-204ENST00000377349 IGSF9Q9P2J2 1179 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 EPS15L1Q9UBC2 864 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 MIA3Q5JRA6 1907 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 TGM5O43548 720 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 C1RP00736 705 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 OR52Z1P0C646 297 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 RBM25P49756 843 aaKnown RBP21.21■□□□□ 0.99
CBWD3-204ENST00000377349 NCBP1Q09161 790 aaKnown RBP21.21■□□□□ 0.99
CBWD3-204ENST00000377349 GRIK3Q13003 919 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 NBR1Q14596 966 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 TTC38Q5R3I4 469 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 CDCA2Q69YH5 1023 aaPredicted RBP21.21■□□□□ 0.99
CBWD3-204ENST00000377349 GPR65Q8IYL9 337 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 FLCNQ8NFG4 579 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 FBXO18Q8NFZ0 1043 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 HDAC7Q8WUI4 952 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 COLEC11Q9BWP8 271 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 FOXP1Q9H334 677 aaPredicted RBP21.21■□□□□ 0.99
CBWD3-204ENST00000377349 KLK14Q9P0G3 267 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 FNIP2Q9P278 1114 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 ADAM28Q9UKQ2 775 aa21.21■□□□□ 0.99
CBWD3-204ENST00000377349 NOL7Q9UMY1 257 aaKnown RBP21.21■□□□□ 0.99
CBWD3-204ENST00000377349 CITO14578 2027 aa21.2■□□□□ 0.98
CBWD3-204ENST00000377349 PRR23AA6NEV1 266 aa21.2■□□□□ 0.98
CBWD3-204ENST00000377349 XRCC6P12956 609 aaKnown RBP eCLIP21.2■□□□□ 0.98
CBWD3-204ENST00000377349 RABEP1Q15276 862 aa21.2■□□□□ 0.98
CBWD3-204ENST00000377349 PALB2Q86YC2 1186 aa21.2■□□□□ 0.98
CBWD3-204ENST00000377349 NOSTRINQ8IVI9 506 aa21.2■□□□□ 0.98
CBWD3-204ENST00000377349 SMG7Q92540 1137 aaKnown RBP21.2■□□□□ 0.98
CBWD3-204ENST00000377349 NT5C3AQ9H0P0 336 aa21.2■□□□□ 0.98
CBWD3-204ENST00000377349 CXCL16Q9H2A7 254 aa21.2■□□□□ 0.98
CBWD3-204ENST00000377349 MED24O75448 989 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 RPL17P18621 184 aaKnown RBP21.19■□□□□ 0.98
CBWD3-204ENST00000377349 USP41Q3LFD5 358 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 MCTP1Q6DN14 999 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 CATSPER3Q86XQ3 398 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 HACE1Q8IYU2 909 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 SIX5Q8N196 739 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 ERMNQ8TAM6 284 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 BSNDQ8WZ55 320 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 FZD8Q9H461 694 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 PLEKHA4Q9H4M7 779 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 DPP7Q9UHL4 492 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 OTOGLQ3ZCN5 2332 aa21.19■□□□□ 0.98
CBWD3-204ENST00000377349 KRBA1A5PL33 1030 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 PTGESO14684 152 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 NR1I2O75469 434 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 EDN1P05305 212 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 GBP2P32456 591 aaPredicted RBP21.18■□□□□ 0.98
CBWD3-204ENST00000377349 NAB2Q15742 525 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 FAM187BQ17R55 369 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 RTP2Q5QGT7 225 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 GLYCTKQ8IVS8 523 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 CCDC105Q8IYK2 499 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 RIN2Q8WYP3 895 aaPredicted RBP21.18■□□□□ 0.98
CBWD3-204ENST00000377349 PRIMPOLQ96LW4 560 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.18■□□□□ 0.98
CBWD3-204ENST00000377349 PARP2Q9UGN5 583 aa21.18■□□□□ 0.98
CBWD3-204ENST00000377349 MYH11P35749 1972 aa21.17■□□□□ 0.98
CBWD3-204ENST00000377349 LRRIQ4A6NIV6 560 aa21.17■□□□□ 0.98
CBWD3-204ENST00000377349 FRMD5Q7Z6J6 570 aa21.17■□□□□ 0.98
CBWD3-204ENST00000377349 SLC44A3Q8N4M1 653 aa21.17■□□□□ 0.98
CBWD3-204ENST00000377349 STAMQ92783 540 aa21.17■□□□□ 0.98
CBWD3-204ENST00000377349 PDZD7Q9H5P4 517 aa21.17■□□□□ 0.98
CBWD3-204ENST00000377349 TUFT1Q9NNX1 390 aa21.17■□□□□ 0.98
CBWD3-204ENST00000377349 PRMT7Q9NVM4 692 aaPredicted RBP21.17■□□□□ 0.98
CBWD3-204ENST00000377349 ZDHHC7Q9NXF8 308 aa21.17■□□□□ 0.98
CBWD3-204ENST00000377349 PDCD11Q14690 1871 aaKnown RBP21.17■□□□□ 0.98
CBWD3-204ENST00000377349 TUSC3Q13454 348 aa21.16■□□□□ 0.98
CBWD3-204ENST00000377349 HSP90AA2PQ14568 343 aaPredicted RBP21.16■□□□□ 0.98
CBWD3-204ENST00000377349 TMEM132AQ24JP5 1023 aa21.16■□□□□ 0.98
CBWD3-204ENST00000377349 ELMSAN1Q6PJG2 1045 aa21.16■□□□□ 0.98
CBWD3-204ENST00000377349 PRSS55Q6UWB4 352 aaPredicted RBP21.16■□□□□ 0.98
CBWD3-204ENST00000377349 MCPH1Q8NEM0 835 aa21.16■□□□□ 0.98
CBWD3-204ENST00000377349 PRKD2Q9BZL6 878 aa21.16■□□□□ 0.98
CBWD3-204ENST00000377349 CCDC113Q9H0I3 377 aa21.16■□□□□ 0.98
CBWD3-204ENST00000377349 WNT16Q9UBV4 365 aa21.16■□□□□ 0.98
CBWD3-204ENST00000377349 FBXL21Q9UKT6 434 aa21.16■□□□□ 0.98
CBWD3-204ENST00000377349 DNAH14Q0VDD8 3507 aa21.16■□□□□ 0.98
CBWD3-204ENST00000377349 KIF4AO95239 1232 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 CFHP08603 1231 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 LIG1P18858 919 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 HASPINQ8TF76 798 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 RTP3Q9BQQ7 232 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 CLSTN3Q9BQT9 956 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 POLR3CQ9BUI4 534 aaPredicted RBP21.15■□□□□ 0.98
CBWD3-204ENST00000377349 FBXW11Q9UKB1 542 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 USP20Q9Y2K6 914 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 KIF3AQ9Y496 699 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 CACNA1AO00555 2505 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 COL4A3Q01955 1670 aa21.15■□□□□ 0.98
CBWD3-204ENST00000377349 SF3B1O75533 1304 aaKnown RBP eCLIP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 209.4 ms