RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 KSR1Q8IVT5 923 aa23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 STOML1Q9UBI4 398 aa23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 MROH7Q68CQ1 1323 aa23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 FAM47DPA6NHR8 397 aa23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 PPP1R11O60927 126 aaPredicted RBP23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 TMED2Q15363 201 aa23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 TAF1BQ53T94 588 aaPredicted RBP23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 ZNF746Q6NUN9 644 aaPredicted RBP23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 RPUSD2Q8IZ73 545 aaKnown RBP23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 TRAPPC9Q96Q05 1148 aa23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 RUSC1Q9BVN2 902 aa23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 INTS2Q9H0H0 1204 aaKnown RBP23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 GPCPD1Q9NPB8 672 aa23.51■■□□□ 1.35
SYNDIG1-201ENST00000376862 SPATA31A1Q5TZJ5 1347 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 RASA4BC9J798 803 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 FOXN3O00409 490 aaPredicted RBP23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 RASA4O43374 803 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 TCEA3O75764 348 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 MARK3P27448 753 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 SNX30Q5VWJ9 437 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 CATSPER3Q86XQ3 398 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 C12orf50Q8NA57 414 aaPredicted RBP23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 SCG3Q8WXD2 468 aaKnown RBP23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 CD101Q93033 1021 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 MIPEPQ99797 713 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 TGFB1I1O43294 461 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 ASMTLO95671 621 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 LMNAP02545 664 aaKnown RBP23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 KCNA3P22001 575 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 RASSF2P50749 326 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 CACNA2D1P54289 1103 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 C4orf50Q6ZRC1 276 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 C10orf82Q8WW14 230 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 WNT8AQ9H1J5 351 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 LRRC19Q9H756 370 aa23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 METTL5Q9NRN9 209 aaKnown RBP23.5■■□□□ 1.35
SYNDIG1-201ENST00000376862 DDX60LQ5H9U9 1706 aaKnown RBP23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 DOT1LQ8TEK3 1739 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 MAGEB2O15479 319 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 CLDN3O15551 220 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 ECE2O60344 883 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 CDH16O75309 829 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 POTEJP0CG39 1038 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 TRIM49P0CI25 452 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 TRIM49CP0CI26 452 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 ITIH2P19823 946 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 PTPN4P29074 926 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 RANBP1P43487 201 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 KIF22Q14807 665 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 RCN1Q15293 331 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 DDB1Q16531 1140 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 ZC3H12AQ5D1E8 599 aaKnown RBP23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 ZC3H18Q86VM9 953 aaKnown RBP23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 SNF8Q96H20 258 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 GRID1Q9ULK0 1009 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 TRAFD1O14545 582 aaPredicted RBP23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 GPC5P78333 572 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 GRIK5Q16478 980 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 BMT2Q1RMZ1 405 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 DSTYKQ6XUX3 929 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 ANKRD35Q8N283 1001 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 BICD1Q96G01 975 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 CCDC87Q9NVE4 849 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 APEX2Q9UBZ4 518 aa23.49■■□□□ 1.35
SYNDIG1-201ENST00000376862 MYO3BQ8WXR4 1341 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 A0A1W2PRG0 241 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 IVDP26440 423 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 RXRBP28702 533 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 RBM5P52756 815 aaKnown RBP eCLIP23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 FAM210AQ96ND0 272 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 TLE6Q9H808 572 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 FAM196BA6NMK8 535 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 SFI1A8K8P3 1242 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 SPOPO43791 374 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 LGR5O75473 907 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 KRT36O76013 467 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 PSMC2P35998 433 aaKnown RBP23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 LMNB2Q03252 620 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 ZC2HC1CQ53FD0 456 aaPredicted RBP23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 C16orf86Q6ZW13 317 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 CCNJLQ8IV13 435 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 LRRC47Q8N1G4 583 aaKnown RBP23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 ATG4AQ8WYN0 398 aa23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 RBM41Q96IZ5 413 aaKnown RBP23.48■■□□□ 1.35
SYNDIG1-201ENST00000376862 TOM1O60784 492 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 SKIP12755 728 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 VPS41P49754 854 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 COG2Q14746 738 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 SGO2Q562F6 1265 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 PHLDB3Q6NSJ2 640 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 SYT2Q8N9I0 419 aaPredicted RBP23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 C9orf72Q96LT7 481 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 ZNF287Q9HBT7 754 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 ZFP69BQ9UJL9 534 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 RPL26L1Q9UNX3 145 aaKnown RBP23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 BCS1LQ9Y276 419 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 ACTL7BQ9Y614 415 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 NUMBLQ9Y6R0 609 aa23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 EDF1O60869 148 aaKnown RBP23.47■■□□□ 1.35
SYNDIG1-201ENST00000376862 LDHBP07195 334 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms