RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 C4orf19Q8IY42 314 aa14.58□□□□□ -0.08
CLCN6-205ENST00000376492 SUMF1Q8NBK3 374 aa14.58□□□□□ -0.08
CLCN6-205ENST00000376492 ASAP3Q8TDY4 903 aa14.58□□□□□ -0.08
CLCN6-205ENST00000376492 TCP11Q8WWU5 503 aa14.58□□□□□ -0.08
CLCN6-205ENST00000376492 HAS1Q92839 578 aa14.58□□□□□ -0.08
CLCN6-205ENST00000376492 CCDC51Q96ER9 411 aa14.58□□□□□ -0.08
CLCN6-205ENST00000376492 COLEC11Q9BWP8 271 aa14.58□□□□□ -0.08
CLCN6-205ENST00000376492 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.58□□□□□ -0.08
CLCN6-205ENST00000376492 KLK14Q9P0G3 267 aa14.58□□□□□ -0.08
CLCN6-205ENST00000376492 FNIP2Q9P278 1114 aa14.58□□□□□ -0.08
CLCN6-205ENST00000376492 PPME1Q9Y570 386 aa14.58□□□□□ -0.08
CLCN6-205ENST00000376492 DKC1O60832 514 aaKnown RBP eCLIP14.57□□□□□ -0.086e-6■■■□□ 15
CLCN6-205ENST00000376492 NR1I2O75469 434 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 ZMYND10O75800 440 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 STARD6P59095 220 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 CYP4A11Q02928 519 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 MBTD1Q05BQ5 628 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 SNW1Q13573 536 aaKnown RBP14.57□□□□□ -0.08
CLCN6-205ENST00000376492 CTTNQ14247 550 aaKnown RBP14.57□□□□□ -0.08
CLCN6-205ENST00000376492 AMHR2Q16671 573 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 USP41Q3LFD5 358 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 NCAPH2Q6IBW4 605 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 GRASPQ7Z6J2 395 aaPredicted RBP14.57□□□□□ -0.08
CLCN6-205ENST00000376492 EXOC8Q8IYI6 725 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 OXER1Q8TDS5 423 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 HASPINQ8TF76 798 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 DYDC2Q96IM9 177 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 FAM20AQ96MK3 541 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 MTRQ99707 1265 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 PAAF1Q9BRP4 392 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 TRIM6Q9C030 488 aaPredicted RBP14.57□□□□□ -0.08
CLCN6-205ENST00000376492 DLL3Q9NYJ7 618 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 ADAM28Q9UKQ2 775 aa14.57□□□□□ -0.08
CLCN6-205ENST00000376492 MTF2Q9Y483 593 aaPredicted RBP14.57□□□□□ -0.08
CLCN6-205ENST00000376492 ASAP2O43150 1006 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 NPTXRO95502 500 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 ARF4P18085 180 aaPredicted RBP14.56□□□□□ -0.08
CLCN6-205ENST00000376492 AXLP30530 894 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 MCM2P49736 904 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 HMGN5P82970 282 aaKnown RBP14.56□□□□□ -0.08
CLCN6-205ENST00000376492 CAPSQ13938 189 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 EPHA7Q15375 998 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 RSPO4Q2I0M5 234 aaPredicted RBP14.56□□□□□ -0.08
CLCN6-205ENST00000376492 POTEDQ86YR6 584 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 TNFRSF25Q93038 417 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 FBXW11Q9UKB1 542 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 CDH7Q9ULB5 785 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 GIT1Q9Y2X7 761 aa14.56□□□□□ -0.08
CLCN6-205ENST00000376492 EPG5Q9HCE0 2579 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 CCDC194A0A1B0GVG4 234 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 CCL16O15467 120 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 ADAM12O43184 909 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 CCNT1O60563 726 aaKnown RBP14.55□□□□□ -0.08
CLCN6-205ENST00000376492 KINO60870 393 aaKnown RBP14.55□□□□□ -0.08
CLCN6-205ENST00000376492 C1RP00736 705 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 KRT2P35908 639 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 SPIRE1Q08AE8 756 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 GRIK3Q13003 919 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 TRIM29Q14134 588 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 MXD4Q14582 209 aaPredicted RBP14.55□□□□□ -0.08
CLCN6-205ENST00000376492 PPP4R3AQ6IN85 833 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 OTUD6AQ7L8S5 288 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 NEK8Q86SG6 692 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 IFNLR1Q8IU57 520 aaPredicted RBP14.55□□□□□ -0.08
CLCN6-205ENST00000376492 GPR65Q8IYL9 337 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 ITFG1Q8TB96 612 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 FGF13Q92913 245 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 SNX21Q969T3 373 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 ZSWIM4Q9H7M6 989 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 BRMS1Q9HCU9 246 aa14.55□□□□□ -0.08
CLCN6-205ENST00000376492 SPATA6Q9NWH7 488 aaPredicted RBP14.55□□□□□ -0.08
CLCN6-205ENST00000376492 KANSL1LA0AUZ9 987 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 CASTOR2A6NHX0 329 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 TADA2AO75478 443 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 KIF4AO95239 1232 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 CD2BP2O95400 341 aaKnown RBP14.54□□□□□ -0.08
CLCN6-205ENST00000376492 C8AP07357 584 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 CD72P21854 359 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 GLRA2P23416 452 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 CREMQ03060 361 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 NCBP1Q09161 790 aaKnown RBP14.54□□□□□ -0.08
CLCN6-205ENST00000376492 TFDP1Q14186 410 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 HSP90AA2PQ14568 343 aaPredicted RBP14.54□□□□□ -0.08
CLCN6-205ENST00000376492 UBXN2BQ14CS0 331 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 PCBP1Q15365 356 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLCN6-205ENST00000376492 MLF2Q15773 248 aaPredicted RBP14.54□□□□□ -0.08
CLCN6-205ENST00000376492 EARS2Q5JPH6 523 aaKnown RBP14.54□□□□□ -0.08
CLCN6-205ENST00000376492 PIK3AP1Q6ZUJ8 805 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 TPH2Q8IWU9 490 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 HACE1Q8IYU2 909 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 SHDQ96IW2 340 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 TMX3Q96JJ7 454 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 KXD1Q9BQD3 176 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 CLSTN3Q9BQT9 956 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 DDX23Q9BUQ8 820 aaKnown RBP14.54□□□□□ -0.08
CLCN6-205ENST00000376492 PARP2Q9UGN5 583 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 POLIQ9UNA4 740 aa14.54□□□□□ -0.08
CLCN6-205ENST00000376492 ZFP37Q9Y6Q3 630 aaPredicted RBP14.54□□□□□ -0.08
CLCN6-205ENST00000376492 SF3B1O75533 1304 aaKnown RBP eCLIP14.54□□□□□ -0.089e-7■■■■■ 57.4
CLCN6-205ENST00000376492 CACNA1IQ9P0X4 2223 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms