RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 PPP2R5AQ15172 486 aa25.65■■□□□ 1.7
C9orf47-202ENST00000375850 GPRC5CQ9NQ84 441 aa25.65■■□□□ 1.7
C9orf47-202ENST00000375850 KLK14Q9P0G3 267 aa25.65■■□□□ 1.7
C9orf47-202ENST00000375850 ZFHX2Q9C0A1 2572 aaPredicted RBP25.64■■□□□ 1.7
C9orf47-202ENST00000375850 PRR23AA6NEV1 266 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 THP07101 528 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 SRFP11831 508 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 RPA1P27694 616 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 MCM7P33993 719 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 NEK4P51957 841 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 PRPF4BQ13523 1007 aaKnown RBP25.64■■□□□ 1.7
C9orf47-202ENST00000375850 TMEM132AQ24JP5 1023 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 CDR2LQ86X02 465 aaPredicted RBP25.64■■□□□ 1.7
C9orf47-202ENST00000375850 SLC44A3Q8N4M1 653 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 PIK3R5Q8WYR1 880 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 NKD2Q969F2 451 aaPredicted RBP25.64■■□□□ 1.7
C9orf47-202ENST00000375850 TTPALQ9BTX7 342 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 TMEM60Q9H2L4 133 aa25.64■■□□□ 1.7
C9orf47-202ENST00000375850 USP34Q70CQ2 3546 aa25.63■■□□□ 1.69
C9orf47-202ENST00000375850 WNT7AO00755 349 aa25.63■■□□□ 1.69
C9orf47-202ENST00000375850 JAK2O60674 1132 aa25.63■■□□□ 1.69
C9orf47-202ENST00000375850 HNRNPA1P09651 372 aaKnown RBP eCLIP25.63■■□□□ 1.69
C9orf47-202ENST00000375850 LAMP2P13473 410 aa25.63■■□□□ 1.69
C9orf47-202ENST00000375850 CYP11B2P19099 503 aa25.63■■□□□ 1.69
C9orf47-202ENST00000375850 NAMPTP43490 491 aa25.63■■□□□ 1.69
C9orf47-202ENST00000375850 HAUS3Q68CZ6 603 aa25.63■■□□□ 1.69
C9orf47-202ENST00000375850 MAEAQ7L5Y9 396 aa25.63■■□□□ 1.69
C9orf47-202ENST00000375850 APBB1IPQ7Z5R6 666 aaPredicted RBP25.63■■□□□ 1.69
C9orf47-202ENST00000375850 B3GALT6Q96L58 329 aa25.63■■□□□ 1.69
C9orf47-202ENST00000375850 MYADMQ96S97 322 aa25.63■■□□□ 1.69
C9orf47-202ENST00000375850 ARHGEF35A5YM69 484 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 ACKR2O00590 384 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 MED24O75448 989 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 OR52Z1P0C646 297 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 SPATA31D3P0C874 917 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 RFX1P22670 979 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 EFNA5P52803 228 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 LIN9Q5TKA1 542 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 PADI6Q6TGC4 694 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 SPATA31D4Q6ZUB0 917 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 ASCL5Q7RTU5 278 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 DTWD2Q8NBA8 298 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 DEPTORQ8TB45 409 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 PDZD7Q9H5P4 517 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 FBXW11Q9UKB1 542 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 C2orf16Q68DN1 1984 aa25.62■■□□□ 1.69
C9orf47-202ENST00000375850 TDRD15B5MCY1 1934 aaKnown RBP25.61■■□□□ 1.69
C9orf47-202ENST00000375850 PRKCBP05771 671 aa25.61■■□□□ 1.69
C9orf47-202ENST00000375850 HOXA9P31269 272 aa25.61■■□□□ 1.69
C9orf47-202ENST00000375850 DCAF4L1Q3SXM0 396 aa25.61■■□□□ 1.69
C9orf47-202ENST00000375850 RTP2Q5QGT7 225 aa25.61■■□□□ 1.69
C9orf47-202ENST00000375850 RTL10Q7L3V2 364 aa25.61■■□□□ 1.69
C9orf47-202ENST00000375850 FOXP1Q9H334 677 aaPredicted RBP25.61■■□□□ 1.69
C9orf47-202ENST00000375850 STK24Q9Y6E0 443 aa25.61■■□□□ 1.69
C9orf47-202ENST00000375850 A0A087WWV3 80 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 ANHXE9PGG2 379 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 PI15O43692 258 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 NARSO43776 548 aaKnown RBP25.6■■□□□ 1.69
C9orf47-202ENST00000375850 RECQL4O94761 1208 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 CFHP08603 1231 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 POU2F2P09086 479 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 RBM25P49756 843 aaKnown RBP25.6■■□□□ 1.69
C9orf47-202ENST00000375850 ANGPT1Q15389 498 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 FAM171A1Q5VUB5 890 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 PHLDB3Q6NSJ2 640 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 GET4Q7L5D6 327 aaPredicted RBP25.6■■□□□ 1.69
C9orf47-202ENST00000375850 RSAD2Q8WXG1 361 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 IFT74Q96LB3 600 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 LLPHQ9BRT6 129 aaKnown RBP25.6■■□□□ 1.69
C9orf47-202ENST00000375850 CCDC113Q9H0I3 377 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 SNTG2Q9NY99 539 aa25.6■■□□□ 1.69
C9orf47-202ENST00000375850 CASTOR2A6NHX0 329 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 STK25O00506 426 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 PTGESO14684 152 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 KIF4AO95239 1232 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 MYBP10242 640 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 RPL17P18621 184 aaKnown RBP25.59■■□□□ 1.69
C9orf47-202ENST00000375850 TRAPPC10P48553 1259 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 FOSBP53539 338 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 FOXK2Q01167 660 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 PSMD5Q16401 504 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 PRSS55Q6UWB4 352 aaPredicted RBP25.59■■□□□ 1.69
C9orf47-202ENST00000375850 FRMD5Q7Z6J6 570 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 GLYCTKQ8IVS8 523 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 LNX1Q8TBB1 728 aaPredicted RBP25.59■■□□□ 1.69
C9orf47-202ENST00000375850 KIFAP3Q92845 792 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 C8orf76Q96K31 380 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 SEMA4AQ9H3S1 761 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 SLC2A4RGQ9NR83 387 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 PLXNA3P51805 1871 aa25.59■■□□□ 1.69
C9orf47-202ENST00000375850 TMEM189-UBE2V1I3L0A0 370 aa25.58■■□□□ 1.69
C9orf47-202ENST00000375850 XYLBO75191 536 aa25.58■■□□□ 1.69
C9orf47-202ENST00000375850 FSHRP23945 695 aa25.58■■□□□ 1.69
C9orf47-202ENST00000375850 HTR4Q13639 388 aa25.58■■□□□ 1.69
C9orf47-202ENST00000375850 UVSSAQ2YD98 709 aa25.58■■□□□ 1.69
C9orf47-202ENST00000375850 POTEGQ6S5H5 508 aa25.58■■□□□ 1.69
C9orf47-202ENST00000375850 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.58■■□□□ 1.69
C9orf47-202ENST00000375850 RABGGTAQ92696 567 aa25.58■■□□□ 1.69
C9orf47-202ENST00000375850 CLSTN3Q9BQT9 956 aa25.58■■□□□ 1.69
C9orf47-202ENST00000375850 PAAF1Q9BRP4 392 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms