RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 TDP2O95551 362 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 NPEPPSP55786 919 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 ELAVL2Q12926 359 aaKnown RBP16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 PPP2R5CQ13362 524 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 EMC2Q15006 297 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 ZNF852Q6ZMS4 543 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 TPRG1Q6ZUI0 275 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 RTL10Q7L3V2 364 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 TRIM22Q8IYM9 498 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 NETO1Q8TDF5 533 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 NELL1Q92832 810 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 CLDN23Q96B33 292 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 B3GALT6Q96L58 329 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 MTRQ99707 1265 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 TTPALQ9BTX7 342 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 RPP25Q9BUL9 199 aaKnown RBP16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 EIF2AQ9BY44 585 aaKnown RBP16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 BACH2Q9BYV9 841 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 PRMT8Q9NR22 394 aaPredicted RBP16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 DDX25Q9UHL0 483 aaKnown RBP16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 PCDHA4Q9UN74 947 aa16.5■□□□□ 0.23
CDKN1A-202ENST00000373711 INO80B-WBP1J3KQ70 363 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 EDIL3O43854 480 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 LRP3O75074 770 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 IFNAR1P17181 557 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 RPL17P18621 184 aaKnown RBP16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 PTENP60484 403 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 HSP90AA2PQ14568 343 aaPredicted RBP16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 PSMD5Q16401 504 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 ADCK5Q3MIX3 580 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 Q6ZUG5 572 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 C4orf19Q8IY42 314 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 FAM177A1Q8N128 213 aaPredicted RBP16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 ST13P5Q8NFI4 369 aaPredicted RBP16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 PIK3R5Q8WYR1 880 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 BRF1Q92994 677 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 CHAMP1Q96JM3 812 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 FAM20AQ96MK3 541 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 HES2Q9Y543 173 aa16.49■□□□□ 0.23
CDKN1A-202ENST00000373711 DCDC2BA2VCK2 349 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 F8W810 466 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 CCL16O15467 120 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 FOXD2O60548 495 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 TARSP26639 723 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 YWHABP31946 246 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 POU5F1BQ06416 359 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 ADCY1Q08828 1119 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 UVSSAQ2YD98 709 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 LAIR1Q6GTX8 287 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 GALNT17Q6IS24 598 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 PRSS55Q6UWB4 352 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 IFNLR1Q8IU57 520 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 DNASE1L2Q92874 299 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 CPB2Q96IY4 423 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 KXD1Q9BQD3 176 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 RNF39Q9H2S5 420 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 NXF3Q9H4D5 531 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 MIOSQ9NXC5 875 aa16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 MTF2Q9Y483 593 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-202ENST00000373711 MAN2B1O00754 1011 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 ECI2O75521 394 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 NTHL1P78549 312 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 TUSC3Q13454 348 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 PABPC1LQ4VXU2 614 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 XKR9Q5GH70 373 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 RTP2Q5QGT7 225 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 SLC27A1Q6PCB7 646 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 BLOC1S2Q6QNY1 142 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 BLIDQ8IZY5 108 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 CELF5Q8N6W0 485 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 DDX1Q92499 740 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 LXNQ9BS40 222 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 BMP2KQ9NSY1 1161 aaPredicted RBP16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 GDE1Q9NZC3 331 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 PARP2Q9UGN5 583 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 VWA8A3KMH1 1905 aa16.47■□□□□ 0.23
CDKN1A-202ENST00000373711 NOTCH4Q99466 2003 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 COL4A3Q01955 1670 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 EML1O00423 815 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 MARCH6O60337 910 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 GCFC2P16383 781 aaKnown RBP16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 CD72P21854 359 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 NTRK3Q16288 839 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 FAM171A1Q5VUB5 890 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 KRT25Q7Z3Z0 450 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 CEP57Q86XR8 500 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 NPAS3Q8IXF0 933 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 DAGLBQ8NCG7 672 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 ITFG1Q8TB96 612 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 SLC7A14Q8TBB6 771 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 CCDC43Q96MW1 224 aaKnown RBP16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 NAP1L4Q99733 375 aaKnown RBP16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 CLSTN3Q9BQT9 956 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 NFKBIZQ9BYH8 718 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 ZSWIM4Q9H7M6 989 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 VAV3Q9UKW4 847 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 MRPS23Q9Y3D9 190 aaKnown RBP16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 CHD8Q9HCK8 2581 aa16.46■□□□□ 0.23
CDKN1A-202ENST00000373711 SLC30A4O14863 429 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms