RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 PCDHA12Q9UN75 941 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 FAM170AA1A519 330 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 WDR91A4D1P6 747 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 TMEM191CA6NGB0 347 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 ONECUT3O60422 494 aaPredicted RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 TMEM191BP0C7N4 346 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 SCTRP47872 440 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 LIN9Q5TKA1 542 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 ADAT2Q7Z6V5 191 aaKnown RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 TRIM15Q9C019 465 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 AP4S1Q9Y587 144 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 TNRC6CQ9HCJ0 1690 aaKnown RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 ARPC4-TTLL3A0A0A6YYG9 625 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 ACSL3O95573 720 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 CCND2P30279 289 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 DNM2P50570 870 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 ORC2Q13416 577 aaPredicted RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 LRRC31Q6UY01 552 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 LENG1Q96BZ8 264 aaPredicted RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.99□□□□□ -1.29
CHD6-203ENST00000373233 DISC1Q9NRI5 854 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 STK17AQ9UEE5 414 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 IVNS1ABPQ9Y6Y0 642 aa6.99□□□□□ -1.29
CHD6-203ENST00000373233 TULP2O00295 520 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 MSL3P1P0C860 447 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 GMPSP49915 693 aaPredicted RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 SEC23AQ15436 765 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 ZNF554Q86TJ5 538 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 TRPV6Q9H1D0 765 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 EMC3Q9P0I2 261 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 TRIM17Q9Y577 477 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 ECM29Q5VYK3 1845 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 PTGS2P35354 604 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 KRT20P35900 424 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 NYAP1Q6ZVC0 841 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 STKLD1Q8NE28 680 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 EHD4Q9H223 541 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 KLHL20Q9Y2M5 609 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 PHF20L1A8MW92 1017 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 PRR23D1E9PI22 279 aaPredicted RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 WDR47O94967 919 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 PRR23D2P0DMB1 279 aaPredicted RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 TUBA3CQ13748 450 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 NOP9Q86U38 636 aaKnown RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 MYCT1Q8N699 235 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 TRIM8Q9BZR9 551 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 CYLDQ9NQC7 956 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 PANK4Q9NVE7 773 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 MBD2Q9UBB5 411 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 N4BP1O75113 896 aaKnown RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 GNA14O95837 355 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 MDH1P40925 334 aaKnown RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 UBXN2AP68543 259 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 GRIK5Q16478 980 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 PAGR1Q9BTK6 254 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 NRDE2Q9H7Z3 1164 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 ABCB11O95342 1321 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 TRIM64CA6NLI5 447 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 SORBS3O60504 671 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 S100A9P06702 114 aaKnown RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 POTEIP0CG38 1075 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 AP3B2Q13367 1082 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 NLRX1Q86UT6 975 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 MYOZ2Q9NPC6 264 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 ATAD3AQ9NVI7 634 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 KIAA1024Q9UPX6 916 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 ZNF839A8K0R7 811 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 PGM1P36871 562 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 IRAK1P51617 712 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 NFIAQ12857 509 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 ZCWPW2Q504Y3 356 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 LSM14BQ9BX40 385 aaKnown RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 LRP5O75197 1615 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 MARK3P27448 753 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 PLIN5Q00G26 463 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 NDUFA5Q16718 116 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 SHC4Q6S5L8 630 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 TERB1Q8NA31 727 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 NYAP2Q9P242 653 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 RREB1Q92766 1687 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 TUBA4AP68366 448 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 IL1RL1Q01638 556 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 TCP11X2Q5H9J9 407 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 CWF19L1Q69YN2 538 aaKnown RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 SMYD4Q8IYR2 804 aaPredicted RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 SUN5Q8TC36 379 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 LARP4BQ92615 738 aaKnown RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 ZKSCAN4Q969J2 545 aaPredicted RBP6.98□□□□□ -1.29
CHD6-203ENST00000373233 SEC16BQ96JE7 1060 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 SLX4Q8IY92 1834 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 USP17L15C9J2P7 530 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 USP17L13C9JLJ4 530 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 USP17L11C9JVI0 530 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 USP17L18D6R9N7 530 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 USP17L22D6RA61 530 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 USP17L17D6RBQ6 530 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 USP17L19D6RCP7 530 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 USP17L20D6RJB6 530 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 H3BQF6 201 aa6.98□□□□□ -1.29
CHD6-203ENST00000373233 KRT38O76015 456 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms