RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 KRT31Q15323 416 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 GSPT2Q8IYD1 628 aaKnown RBP9.54□□□□□ -0.88
PTPRT-206ENST00000373198 ELMO2Q96JJ3 720 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 RALBP11234 206 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 AKIRIN2Q53H80 203 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 SERPINB13Q9UIV8 391 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 HPGDP15428 266 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 CRKLP46109 303 aaKnown RBP9.54□□□□□ -0.88
PTPRT-206ENST00000373198 CLCN6P51797 869 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 GIMAP8Q8ND71 665 aaPredicted RBP9.54□□□□□ -0.88
PTPRT-206ENST00000373198 PNKPQ96T60 521 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 GALNT8Q9NY28 637 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 SERPINB4P48594 390 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 LRRC36Q1X8D7 754 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 SNRNP48Q6IEG0 339 aaKnown RBP9.54□□□□□ -0.88
PTPRT-206ENST00000373198 USP33Q8TEY7 942 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 LSM7Q9UK45 103 aaKnown RBP9.54□□□□□ -0.88
PTPRT-206ENST00000373198 ZFYVE9O95405 1425 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 PDIA3P30101 505 aaKnown RBP9.54□□□□□ -0.88
PTPRT-206ENST00000373198 SCRN1Q12765 414 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 IL31Q6EBC2 164 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 SLC44A2Q8IWA5 706 aaPredicted RBP9.54□□□□□ -0.88
PTPRT-206ENST00000373198 RNF123Q5XPI4 1314 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 NFIBO00712 420 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 CALB1P05937 261 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 PMS2P54278 862 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 TP53BP2Q13625 1128 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 INPP5AQ14642 412 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 SLC25A24Q6NUK1 477 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 HEATR4Q86WZ0 1026 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 ZBTB38Q8NAP3 1195 aaPredicted RBP9.54□□□□□ -0.88
PTPRT-206ENST00000373198 PI4KBQ9UBF8 816 aa9.54□□□□□ -0.88
PTPRT-206ENST00000373198 KBTBD13C9JR72 458 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 TYK2P29597 1187 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 PTH1RQ03431 593 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 FAM83BQ5T0W9 1011 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CIAPIN1Q6FI81 312 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CCDC17Q96LX7 622 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 MAP3K19Q56UN5 1328 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 PALMO75781 387 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CDK17Q00537 523 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CDC16Q13042 620 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 TRIM25Q14258 630 aaKnown RBP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 APOA5Q6Q788 366 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 BTN2A1Q7KYR7 527 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 SH3TC2Q8TF17 1288 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CNOT8Q9UFF9 292 aaKnown RBP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CARMIL3Q8ND23 1372 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 POTEFA5A3E0 1075 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 ENO1P06733 434 aaKnown RBP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 SERPINB3P29508 390 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 TMEM154Q6P9G4 183 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CACNB3P54284 484 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 PLOD1Q02809 727 aaPredicted RBP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 ZNF658Q5TYW1 1059 aaPredicted RBP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 NLGN1Q8N2Q7 840 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CLMNQ96JQ2 1002 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 REXO4Q9GZR2 422 aaKnown RBP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 N6AMT1Q9Y5N5 214 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 RNF103O00237 685 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 MIER2Q8N344 545 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 OR6J1Q8NGC5 347 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 ZNF302Q9NR11 478 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 FAM107AO95990 144 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 GSTM1P09488 218 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 RBM6P78332 1123 aaKnown RBP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 GUCY1A3Q02108 690 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CUL4AQ13619 759 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 FRMD6Q96NE9 622 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 SPRTNQ9H040 489 aaPredicted RBP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CYP2D7A0A087X1C5 515 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 CTSHP09668 335 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 ZBED8Q8IZ13 594 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 SNX24Q9Y343 169 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 NBPF26B4DH59 902 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 ZNF746Q6NUN9 644 aaPredicted RBP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 TLK2Q86UE8 772 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 PARP9Q8IXQ6 854 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 ERLEC1Q96DZ1 483 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 WRNIP1Q96S55 665 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 MAN1B1Q9UKM7 699 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 TK2O00142 265 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 ERVK-10P10266 1014 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 ETFBP38117 255 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 ATPAF2Q8N5M1 289 aa9.53□□□□□ -0.88
PTPRT-206ENST00000373198 RBM41Q96IZ5 413 aaKnown RBP9.53□□□□□ -0.88
PTPRT-206ENST00000373198 HNRNPH2P55795 449 aaKnown RBP9.52□□□□□ -0.88
PTPRT-206ENST00000373198 RAB14P61106 215 aa9.52□□□□□ -0.88
PTPRT-206ENST00000373198 KLHL31Q9H511 634 aa9.52□□□□□ -0.88
PTPRT-206ENST00000373198 SYNGAP1Q96PV0 1343 aa9.52□□□□□ -0.88
PTPRT-206ENST00000373198 GH2P01242 217 aa9.52□□□□□ -0.88
PTPRT-206ENST00000373198 GCLMP48507 274 aa9.52□□□□□ -0.88
PTPRT-206ENST00000373198 PSMC6P62333 389 aa9.52□□□□□ -0.88
PTPRT-206ENST00000373198 C11orf88Q6PI97 169 aa9.52□□□□□ -0.88
PTPRT-206ENST00000373198 CNPY4Q8N129 248 aa9.52□□□□□ -0.88
PTPRT-206ENST00000373198 RAVER2Q9HCJ3 691 aaKnown RBP9.52□□□□□ -0.88
PTPRT-206ENST00000373198 OLFML3Q9NRN5 406 aa9.52□□□□□ -0.88
PTPRT-206ENST00000373198 EHD2Q9NZN4 543 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms