RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 AAASQ9NRG9 546 aa13.83□□□□□ -0.2
CHD1L-202ENST00000369258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.83□□□□□ -0.2
CHD1L-202ENST00000369258 KRT16P08779 473 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 SLMAPQ14BN4 828 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 CNGA2Q16280 664 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 ABCB5Q2M3G0 1257 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 CPXCR1Q8N123 301 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 POMGNT1Q8WZA1 660 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 ARHGEF2Q92974 986 aaKnown RBP13.82□□□□□ -0.2
CHD1L-202ENST00000369258 ZNF653Q96CK0 615 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 TMEM237Q96Q45 408 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 ZSWIM1Q9BR11 485 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 FAM167BQ9BTA0 163 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 WDR11Q9BZH6 1224 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.82□□□□□ -0.2
CHD1L-202ENST00000369258 IGF2BP3O00425 579 aaKnown RBP eCLIP13.82□□□□□ -0.2
CHD1L-202ENST00000369258 BANF1O75531 89 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 ADRB2P07550 413 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 GAP43P17677 238 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 ALDH5A1P51649 535 aaPredicted RBP13.82□□□□□ -0.2
CHD1L-202ENST00000369258 C1orf220Q5T0J3 134 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 SYCP2LQ5T4T6 812 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 SEL1L2Q5TEA6 688 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 BTNL9Q6UXG8 535 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 C15orf52Q6ZUT6 534 aaKnown RBP13.82□□□□□ -0.2
CHD1L-202ENST00000369258 ANKS1BQ7Z6G8 1248 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 RHOT2Q8IXI1 618 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 TBC1D22AQ8WUA7 517 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 NSMCE1Q8WV22 266 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 SLC5A5Q92911 643 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 HAUS1Q96CS2 278 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 ZNF577Q9BSK1 485 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 CCDC134Q9H6E4 229 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 HOMER3Q9NSC5 361 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 PCDHA3Q9Y5H8 950 aa13.82□□□□□ -0.2
CHD1L-202ENST00000369258 MIF4GDA9UHW6 222 aaKnown RBP13.81□□□□□ -0.2
CHD1L-202ENST00000369258 SNX3O60493 162 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 BMP3P12645 472 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 PEX5P50542 639 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 KRT17Q04695 432 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 AP3B2Q13367 1082 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 CRY2Q49AN0 593 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 ATP13A4Q4VNC1 1196 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 MOXD1Q6UVY6 613 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 CRELD2Q6UXH1 353 aaPredicted RBP13.81□□□□□ -0.2
CHD1L-202ENST00000369258 FMNL3Q8IVF7 1028 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 GLIS1Q8NBF1 620 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 ZNF564Q8TBZ8 553 aaPredicted RBP13.81□□□□□ -0.2
CHD1L-202ENST00000369258 USTQ9Y2C2 406 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 TBX3O15119 743 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 RARGP13631 454 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 KRT5P13647 590 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 PEX3P56589 373 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 RIPK1Q13546 671 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 RC3H1Q5TC82 1133 aaKnown RBP13.81□□□□□ -0.2
CHD1L-202ENST00000369258 FITM2Q8N6M3 262 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 TMEM109Q9BVC6 243 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 ECT2Q9H8V3 914 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 SLCO1B3Q9NPD5 702 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 PCYOX1Q9UHG3 505 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 USP15Q9Y4E8 981 aaPredicted RBP13.81□□□□□ -0.2
CHD1L-202ENST00000369258 AFF2P51816 1311 aa13.81□□□□□ -0.2
CHD1L-202ENST00000369258 ANP32DO95626 131 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 ZSCAN5DPP0CG00 497 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 NQO1P15559 274 aaKnown RBP13.8□□□□□ -0.2
CHD1L-202ENST00000369258 COILP38432 576 aaPredicted RBP13.8□□□□□ -0.2
CHD1L-202ENST00000369258 RNF207Q6ZRF8 634 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 EPS8L1Q8TE68 723 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 MKL1Q969V6 931 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 FAM20AQ96MK3 541 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 OLFML3Q9NRN5 406 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 STK24Q9Y6E0 443 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 NHSQ6T4R5 1651 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 PI4K2BG5E9Z4 385 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 DIAPH2O60879 1101 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 SUN1O94901 812 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 ETS1P14921 441 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 MGAT5Q09328 741 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 SPP2Q13103 211 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 Q4G0T1 1027 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 KAZNQ674X7 775 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 ERICH1Q86X53 443 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 CCHCR1Q8TD31 782 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 PRMT6Q96LA8 375 aaPredicted RBP13.8□□□□□ -0.2
CHD1L-202ENST00000369258 AGBL1Q96MI9 1066 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 RUNDC3BQ96NL0 473 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 CSRNP1Q96S65 589 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 TMEM117Q9H0C3 514 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.8□□□□□ -0.2
CHD1L-202ENST00000369258 ARHGEF35A5YM69 484 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 PSMD10O75832 226 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 TCF4P15884 667 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 NCALDP61601 193 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 CALCOCO2Q13137 446 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 ZFYVE27Q5T4F4 411 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 SPOPLQ6IQ16 392 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 PADI6Q6TGC4 694 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 VSTM1Q6UX27 236 aa13.8□□□□□ -0.2
CHD1L-202ENST00000369258 SLC13A5Q86YT5 568 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms