RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 COL20A1Q9P218 1284 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 FBXO40Q9UH90 709 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 LCTP09848 1927 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 KBTBD13C9JR72 458 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 KIAA0355O15063 1070 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 RPA1P27694 616 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 CNGA1P29973 690 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 COPB2P35606 906 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 PPP1R2P41236 205 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 PLAURQ03405 335 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 PGM5Q15124 567 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 ZNF658Q5TYW1 1059 aaPredicted RBP9.67□□□□□ -0.86
TPM3-213ENST00000368545 NSMFQ6X4W1 530 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 FAM178BQ8IXR5 827 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 ST13P5Q8NFI4 369 aaPredicted RBP9.67□□□□□ -0.86
TPM3-213ENST00000368545 GRIN3AQ8TCU5 1115 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 RAD54LQ92698 747 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 STAMQ92783 540 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 SLC5A5Q92911 643 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 MFSD14AQ96MC6 490 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 PNMA5Q96PV4 448 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 CEP89Q96ST8 783 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 PLIN2Q99541 437 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 RIT2Q99578 217 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 TRIM9Q9C026 710 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 MUC3BQ9H195 1237 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 BLZF1Q9H2G9 400 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 EPHX3Q9H6B9 360 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 PXMP2Q9NR77 195 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 TOR4AQ9NXH8 423 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 MAGEC2Q9UBF1 373 aaPredicted RBP9.67□□□□□ -0.86
TPM3-213ENST00000368545 VAV3Q9UKW4 847 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 PLAAQ9Y263 795 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 A0A1W2PQH9 124 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 GAS7O60861 476 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 PSMD10O75832 226 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 RHOBTB3O94955 611 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 BPNT1O95861 308 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 MUTP22033 750 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 CASP1P29466 404 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 CDC25BP30305 580 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 FPGSQ05932 587 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 PPIGQ13427 754 aaKnown RBP eCLIP9.66□□□□□ -0.868e-7■□□□□ 10.5
TPM3-213ENST00000368545 PLS1Q14651 629 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 ARHGEF16Q5VV41 709 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 NCAPH2Q6IBW4 605 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 RIOX2Q8IUF8 465 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 SYNPOQ8N3V7 929 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 CYP2W1Q8TAV3 490 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 ENOX1Q8TC92 643 aaKnown RBP9.66□□□□□ -0.86
TPM3-213ENST00000368545 STK35Q8TDR2 534 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 GJA10Q969M2 543 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 RMDN3Q96TC7 470 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 APBA2Q99767 749 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 ZNF577Q9BSK1 485 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 POLR3CQ9BUI4 534 aaPredicted RBP9.66□□□□□ -0.86
TPM3-213ENST00000368545 TRIM5Q9C035 493 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 BLOC1S4Q9NUP1 217 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 POLR3KQ9Y2Y1 108 aaPredicted RBP9.66□□□□□ -0.86
TPM3-213ENST00000368545 RIPK3Q9Y572 518 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.66□□□□□ -0.86
TPM3-213ENST00000368545 KIAA1217Q5T5P2 1943 aa9.66□□□□□ -0.86
TPM3-213ENST00000368545 GOLGA6L6A8MZA4 724 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 STAM2O75886 525 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 F11P03951 625 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 STIM1Q13586 685 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 BAATQ14032 418 aaPredicted RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 NCAPHQ15003 741 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 BRDTQ58F21 947 aaPredicted RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 THNSL2Q86YJ6 484 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 NEK9Q8TD19 979 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 NSUN6Q8TEA1 469 aaKnown RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 LRRC15Q8TF66 581 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 GAL3ST3Q96A11 431 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 PDCD2LQ9BRP1 358 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 TEKT3Q9BXF9 490 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 JADE2Q9NQC1 790 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 EXOC1Q9NV70 894 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 CYP39A1Q9NYL5 469 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 HCN2Q9UL51 889 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 CYP8B1Q9UNU6 501 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 UBIAD1Q9Y5Z9 338 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 FRMPD3Q5JV73 1810 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 PVALEFA0A1B0GWK0 134 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 DCDC2BA2VCK2 349 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 PDE2AO00408 941 aaPredicted RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 IPO5O00410 1097 aaKnown RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 KLRC4O43908 158 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 HOXD8P13378 290 aaPredicted RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 ITGB5P18084 799 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 EIF2AK2P19525 551 aaKnown RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 CCND2P30279 289 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 HERVK_113P62684 666 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 ASIC1P78348 528 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 MTMR1Q13613 665 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 TM4SF20Q53R12 229 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 PSRC1Q6PGN9 363 aaPredicted RBP9.65□□□□□ -0.86
TPM3-213ENST00000368545 SLC39A5Q6ZMH5 540 aa9.65□□□□□ -0.86
TPM3-213ENST00000368545 DNERQ8NFT8 737 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms