RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 HSD3B2P26439 372 aa9.04□□□□□ -0.96
H3F3A-201ENST00000366813 SUMO1P63165 101 aaKnown RBP9.04□□□□□ -0.96
H3F3A-201ENST00000366813 WWC2Q6AWC2 1192 aa9.04□□□□□ -0.96
H3F3A-201ENST00000366813 DENND5AQ6IQ26 1287 aa9.04□□□□□ -0.96
H3F3A-201ENST00000366813 FASTKD5Q7L8L6 764 aaKnown RBP9.04□□□□□ -0.96
H3F3A-201ENST00000366813 CPA5Q8WXQ8 436 aa9.04□□□□□ -0.96
H3F3A-201ENST00000366813 TRIM43Q96BQ3 446 aaPredicted RBP9.04□□□□□ -0.96
H3F3A-201ENST00000366813 CFAP53Q96M91 514 aa9.04□□□□□ -0.96
H3F3A-201ENST00000366813 ANKRD2Q9GZV1 360 aa9.04□□□□□ -0.96
H3F3A-201ENST00000366813 GRXCR1A8MXD5 290 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 PI4K2BG5E9Z4 385 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 TAF5LO75529 589 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 PLS3P13797 630 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 ITGB8P26012 769 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 IGHMBP2P38935 993 aaKnown RBP9.03□□□□□ -0.96
H3F3A-201ENST00000366813 CHRNDQ07001 517 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 RTP5Q14D33 572 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 NTRK3Q16288 839 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 FAM110CQ1W6H9 321 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 PLEKHG4Q58EX7 1191 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 MFSD14BQ5SR56 506 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 ACBD5Q5T8D3 534 aaPredicted RBP9.03□□□□□ -0.96
H3F3A-201ENST00000366813 C16orf86Q6ZW13 317 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 HOOK2Q96ED9 719 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 ZNF112Q9UJU3 913 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 ZHX2Q9Y6X8 837 aa9.03□□□□□ -0.96
H3F3A-201ENST00000366813 SPEF2Q9C093 1822 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 CHD9Q3L8U1 2897 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 MAST2Q6P0Q8 1798 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 ARNTLO00327 626 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 PRICKLE3O43900 615 aaPredicted RBP9.02□□□□□ -0.97
H3F3A-201ENST00000366813 ASMTLO95671 621 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 C6orf222P0C671 652 aaPredicted RBP9.02□□□□□ -0.97
H3F3A-201ENST00000366813 TESK1Q15569 626 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 AAK1Q2M2I8 961 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 TRIM60Q495X7 471 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 ZNF804AQ7Z570 1209 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 CARFQ8N187 725 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 SYNPOQ8N3V7 929 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 CCDC191Q8NCU4 936 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 ZBTB8AQ96BR9 441 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 CWC25Q9NXE8 425 aaPredicted RBP9.02□□□□□ -0.97
H3F3A-201ENST00000366813 MARCH2Q9P0N8 246 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 SLC45A1Q9Y2W3 748 aa9.02□□□□□ -0.97
H3F3A-201ENST00000366813 SARSP49591 514 aaKnown RBP9.01□□□□□ -0.97
H3F3A-201ENST00000366813 CCL14Q16627 93 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 ZFYVE27Q5T4F4 411 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 EGFLAMQ63HQ2 1017 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 E4F1Q66K89 784 aaPredicted RBP9.01□□□□□ -0.97
H3F3A-201ENST00000366813 SLC39A5Q6ZMH5 540 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 FERMT3Q86UX7 667 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 FAM83AQ86UY5 434 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 PPIL6Q8IXY8 311 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 DDX1Q92499 740 aaKnown RBP9.01□□□□□ -0.97
H3F3A-201ENST00000366813 NOX5Q96PH1 765 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 MMP19Q99542 508 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 AP5M1Q9H0R1 490 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 NTMQ9P121 344 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 TMEFF2Q9UIK5 374 aaPredicted RBP9.01□□□□□ -0.97
H3F3A-201ENST00000366813 SIT1Q9Y3P8 196 aa9.01□□□□□ -0.97
H3F3A-201ENST00000366813 USP34Q70CQ2 3546 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 BLACEA4D250 179 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 PPP1R12AO14974 1030 aaPredicted RBP9□□□□□ -0.97
H3F3A-201ENST00000366813 MEFVO15553 781 aaPredicted RBP9□□□□□ -0.97
H3F3A-201ENST00000366813 ADRB1P08588 477 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 ZKSCAN1P17029 563 aaPredicted RBP9□□□□□ -0.97
H3F3A-201ENST00000366813 GJA9P57773 515 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 TCEA2Q15560 299 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 TKFCQ3LXA3 575 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 TREML2Q5T2D2 321 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 CCDC129Q6ZRS4 1044 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 C15orf52Q6ZUT6 534 aaKnown RBP9□□□□□ -0.97
H3F3A-201ENST00000366813 USP53Q70EK8 1073 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 KIAA0907Q7Z7F0 614 aaPredicted RBP9□□□□□ -0.97
H3F3A-201ENST00000366813 DCP2Q8IU60 420 aaKnown RBP9□□□□□ -0.97
H3F3A-201ENST00000366813 CCDC103Q8IW40 242 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 DDX11Q96FC9 970 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 MPHOSPH8Q99549 860 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 NCOA5Q9HCD5 579 aaKnown RBP9□□□□□ -0.97
H3F3A-201ENST00000366813 DBF4Q9UBU7 674 aaPredicted RBP9□□□□□ -0.97
H3F3A-201ENST00000366813 AFG3L2Q9Y4W6 797 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 NPFFR2Q9Y5X5 522 aa9□□□□□ -0.97
H3F3A-201ENST00000366813 CHD7Q9P2D1 2997 aa8.99□□□□□ -0.97
H3F3A-201ENST00000366813 DLG5Q8TDM6 1919 aa8.99□□□□□ -0.97
H3F3A-201ENST00000366813 CACNA1BQ00975 2339 aa8.99□□□□□ -0.97
H3F3A-201ENST00000366813 TRIM75PA6NK02 468 aa8.99□□□□□ -0.97
H3F3A-201ENST00000366813 SPATS1Q496A3 300 aa8.99□□□□□ -0.97
H3F3A-201ENST00000366813 GJC2Q5T442 439 aaPredicted RBP8.99□□□□□ -0.97
H3F3A-201ENST00000366813 IQCEQ6IPM2 695 aa8.99□□□□□ -0.97
H3F3A-201ENST00000366813 FAM177A1Q8N128 213 aaPredicted RBP8.99□□□□□ -0.97
H3F3A-201ENST00000366813 ANKS1AQ92625 1134 aa8.99□□□□□ -0.97
H3F3A-201ENST00000366813 MRPL4Q9BYD3 311 aaKnown RBP8.99□□□□□ -0.97
H3F3A-201ENST00000366813 HYPKQ9NX55 129 aa8.99□□□□□ -0.97
H3F3A-201ENST00000366813 TMOD2Q9NZR1 351 aa8.99□□□□□ -0.97
H3F3A-201ENST00000366813 SPTBN4Q9H254 2564 aa8.99□□□□□ -0.97
H3F3A-201ENST00000366813 PLXNB2O15031 1838 aa8.98□□□□□ -0.97
H3F3A-201ENST00000366813 DNM1LO00429 736 aa8.98□□□□□ -0.97
H3F3A-201ENST00000366813 PLD2O14939 933 aa8.98□□□□□ -0.97
H3F3A-201ENST00000366813 ERC2O15083 957 aa8.98□□□□□ -0.97
H3F3A-201ENST00000366813 DLX2Q07687 328 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms