RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 PSMA5P28066 241 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 SPIRE1Q08AE8 756 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 GRIK3Q13003 919 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 CAPSQ13938 189 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 TFDP1Q14186 410 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 UBXN2BQ14CS0 331 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 MLF2Q15773 248 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-212ENST00000366739 PPP4R3AQ6IN85 833 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 NEK8Q86SG6 692 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 IFNLR1Q8IU57 520 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-212ENST00000366739 HACE1Q8IYU2 909 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 FGF13Q92913 245 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 CLSTN3Q9BQT9 956 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 DDX23Q9BUQ8 820 aaKnown RBP12.71□□□□□ -0.37
MRPL55-212ENST00000366739 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 ZSWIM4Q9H7M6 989 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 PARP2Q9UGN5 583 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 CACNA1IQ9P0X4 2223 aa12.71□□□□□ -0.37
MRPL55-212ENST00000366739 FANCMQ8IYD8 2048 aa12.71□□□□□ -0.38
MRPL55-212ENST00000366739 SF3B1O75533 1304 aaKnown RBP eCLIP12.7□□□□□ -0.38
MRPL55-212ENST00000366739 CCL16O15467 120 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 ADAM12O43184 909 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 LAMTOR5O43504 91 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 MARCH6O60337 910 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 C8AP07357 584 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 GCFC2P16383 781 aaKnown RBP12.7□□□□□ -0.38
MRPL55-212ENST00000366739 CD72P21854 359 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 GLRA2P23416 452 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 ARL2P36404 184 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 CSTF1Q05048 431 aaKnown RBP12.7□□□□□ -0.38
MRPL55-212ENST00000366739 POU5F1BQ06416 359 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 STK3Q13188 491 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 HSP90AA2PQ14568 343 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-212ENST00000366739 ZNF528Q3MIS6 628 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 SLC44A4Q53GD3 710 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 PPM1LQ5SGD2 360 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 LIN9Q5TKA1 542 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 MTSS1LQ765P7 747 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 TPH2Q8IWU9 490 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 ITFG1Q8TB96 612 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 CNTNAP3BQ96NU0 1288 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 KXD1Q9BQD3 176 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 TTPALQ9BTX7 342 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 CNTNAP3Q9BZ76 1288 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 NCDNQ9UBB6 729 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 POLIQ9UNA4 740 aa12.7□□□□□ -0.38
MRPL55-212ENST00000366739 TDRD15B5MCY1 1934 aaKnown RBP12.7□□□□□ -0.38
MRPL55-212ENST00000366739 MTCL1Q9Y4B5 1905 aaKnown RBP12.7□□□□□ -0.38
MRPL55-212ENST00000366739 ARID2Q68CP9 1835 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 CASTOR2A6NHX0 329 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 FAM170BA6NMN3 283 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 TBX3O15119 743 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 SPTLC1O15269 473 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 SLITRK3O94933 977 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 KIF4AO95239 1232 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 HNRNPA1P09651 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
MRPL55-212ENST00000366739 PRKCQQ04759 706 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 PSMD5Q16401 504 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
MRPL55-212ENST00000366739 FAM171A1Q5VUB5 890 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 SLC27A1Q6PCB7 646 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 PIK3AP1Q6ZUJ8 805 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 RUFY3Q7L099 469 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 CEP57Q86XR8 500 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 FAM177A1Q8N128 213 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-212ENST00000366739 LNX1Q8TBB1 728 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-212ENST00000366739 OXER1Q8TDS5 423 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 PIK3R5Q8WYR1 880 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 PHF20Q9BVI0 1012 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 GJB4Q9NTQ9 266 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 FBXO4Q9UKT5 387 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 DOCK6Q96HP0 2047 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 ZMYM2Q9UBW7 1377 aa12.69□□□□□ -0.38
MRPL55-212ENST00000366739 MYH15Q9Y2K3 1946 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 EPG5Q9HCE0 2579 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 A0A1B0GUA9 196 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 DTNBO60941 627 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 XYLBO75191 536 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 KRT37O76014 449 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 HOXA9P31269 272 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 TUSC3Q13454 348 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 EARS2Q5JPH6 523 aaKnown RBP12.68□□□□□ -0.38
MRPL55-212ENST00000366739 NPAS3Q8IXF0 933 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 SLC7A14Q8TBB6 771 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 ATRIPQ8WXE1 791 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 ZNF274Q96GC6 653 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-212ENST00000366739 EIF2AK1Q9BQI3 630 aaKnown RBP12.68□□□□□ -0.38
MRPL55-212ENST00000366739 NFKBIZQ9BYH8 718 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 OSBPL6Q9BZF3 934 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 POLR3FQ9H1D9 316 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-212ENST00000366739 CXCL16Q9H2A7 254 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 LTB4R2Q9NPC1 389 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 HCFC1R1Q9NWW0 138 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 PCDHGA2Q9Y5H1 932 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 CACNA1BQ00975 2339 aa12.68□□□□□ -0.38
MRPL55-212ENST00000366739 MIA3Q5JRA6 1907 aa12.67□□□□□ -0.38
MRPL55-212ENST00000366739 A0A087WWV3 80 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms