RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 CXCL9Q07325 125 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 SV2CQ496J9 727 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 ZNF677Q86XU0 584 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 RUBCNQ92622 972 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 PPP1R9AQ9ULJ8 1098 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 SNX9Q9Y5X1 595 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 CHGBP05060 677 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 ACADSBP45954 432 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 ROR1Q01973 937 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 STK4Q13043 487 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 NAA25Q14CX7 972 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 ZNF484Q5JVG2 852 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 FKBP1CQ5VVH2 108 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 NOTUMQ6P988 496 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 DCP1BQ8IZD4 617 aaKnown RBP14.29□□□□□ -0.12
LDB3-202ENST00000361373 PPP1R12CQ9BZL4 782 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 PCDHB2Q9Y5E7 798 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 TXNDC9O14530 226 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 CREB3O43889 395 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 TADA2AO75478 443 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 CLTAP09496 248 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 NR1D1P20393 614 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
LDB3-202ENST00000361373 SNX17Q15036 470 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 GNASQ5JWF2 1037 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 PRAMEF18Q5VWM3 479 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 EFCAB12Q6NXP0 572 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 SYDE1Q6ZW31 735 aaPredicted RBP14.29□□□□□ -0.12
LDB3-202ENST00000361373 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.29□□□□□ -0.12
LDB3-202ENST00000361373 TAAR1Q96RJ0 339 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 DHX35Q9H5Z1 703 aaKnown RBP14.29□□□□□ -0.12
LDB3-202ENST00000361373 NOVA2Q9UNW9 492 aaKnown RBP14.29□□□□□ -0.12
LDB3-202ENST00000361373 CYP26A1O43174 497 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 BNIP3LO60238 219 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 HOXA10P31260 410 aaPredicted RBP14.29□□□□□ -0.12
LDB3-202ENST00000361373 SREBF1P36956 1147 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 SF3A3Q12874 501 aaKnown RBP eCLIP14.29□□□□□ -0.12
LDB3-202ENST00000361373 DCAF4L1Q3SXM0 396 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 CD302Q8IX05 232 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 SP110Q9HB58 689 aa14.29□□□□□ -0.12
LDB3-202ENST00000361373 UCHL3P15374 230 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 EPHX2P34913 555 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 EXOC4Q96A65 974 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 FAM163AQ96GL9 167 aaPredicted RBP14.28□□□□□ -0.12
LDB3-202ENST00000361373 ARHGAP23Q9P227 1491 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 KPNA7A9QM74 516 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 TOM1L1O75674 476 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 ACOT2P49753 483 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 PLEKHH3Q7Z736 793 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 TRIM59Q8IWR1 403 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 EFHD1Q9BUP0 239 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 TMEM60Q9H2L4 133 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 NPHP3-ACAD11A0A0J9YXS1 232 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 COPEO14579 308 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 SLCO1A2P46721 670 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 NFIAQ12857 509 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 SPARCL1Q14515 664 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 TJP2Q9UDY2 1190 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 TBK1Q9UHD2 729 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 FNDC3AQ9Y2H6 1198 aaKnown RBP14.28□□□□□ -0.12
LDB3-202ENST00000361373 CTDNEP1O95476 244 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 HOXC6P09630 235 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 SLC8A1P32418 973 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 CDH6P55285 790 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 ACTR2P61160 394 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 RCOR2Q8IZ40 523 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 SPDYE1Q8NFV5 336 aaPredicted RBP14.28□□□□□ -0.12
LDB3-202ENST00000361373 PDLIM2Q96JY6 352 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 PPME1Q9Y570 386 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 POLRMTO00411 1230 aaKnown RBP14.28□□□□□ -0.12
LDB3-202ENST00000361373 CXCL11O14625 94 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 ACSL3O95573 720 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 CYBBP04839 570 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 SLC7A5Q01650 507 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 ARID5BQ14865 1188 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 PPP1R2P1Q96PQ5 205 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 NT5C1AQ9BXI3 368 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 SENP2Q9HC62 589 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 SYNPO2Q9UMS6 1093 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 CAPN7Q9Y6W3 813 aa14.28□□□□□ -0.12
LDB3-202ENST00000361373 A0A1W2PQJ5 194 aa14.27□□□□□ -0.12
LDB3-202ENST00000361373 MSH4O15457 936 aa14.27□□□□□ -0.12
LDB3-202ENST00000361373 CSPG5O95196 566 aa14.27□□□□□ -0.12
LDB3-202ENST00000361373 MX2P20592 715 aa14.27□□□□□ -0.12
LDB3-202ENST00000361373 PIGHQ14442 188 aaPredicted RBP14.27□□□□□ -0.12
LDB3-202ENST00000361373 ABCB6Q9NP58 842 aa14.27□□□□□ -0.12
LDB3-202ENST00000361373 LSM7Q9UK45 103 aaKnown RBP14.27□□□□□ -0.12
LDB3-202ENST00000361373 POLR1AO95602 1720 aaPredicted RBP14.27□□□□□ -0.12
LDB3-202ENST00000361373 PSMD3O43242 534 aa14.27□□□□□ -0.13
LDB3-202ENST00000361373 SEC31AO94979 1220 aaKnown RBP14.27□□□□□ -0.13
LDB3-202ENST00000361373 VEGFAP15692 232 aaPredicted RBP14.27□□□□□ -0.13
LDB3-202ENST00000361373 CATSPER3Q86XQ3 398 aa14.27□□□□□ -0.13
LDB3-202ENST00000361373 WDR75Q8IWA0 830 aaKnown RBP14.27□□□□□ -0.13
LDB3-202ENST00000361373 ACER1Q8TDN7 264 aa14.27□□□□□ -0.13
LDB3-202ENST00000361373 GBA2Q9HCG7 927 aaPredicted RBP14.27□□□□□ -0.13
LDB3-202ENST00000361373 TXLNGQ9NUQ3 528 aa14.27□□□□□ -0.13
LDB3-202ENST00000361373 MAGED2Q9UNF1 606 aaPredicted RBP14.27□□□□□ -0.13
LDB3-202ENST00000361373 PPLO60437 1756 aa14.27□□□□□ -0.13
LDB3-202ENST00000361373 ALDH1A1P00352 501 aa14.27□□□□□ -0.13
LDB3-202ENST00000361373 DCLK2Q8N568 766 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms