RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 RBBP7Q16576 425 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 NCAPG2Q86XI2 1143 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 BBS2Q9BXC9 721 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 MAGEB5Q9BZ81 275 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 ERVV-2B6SEH9 535 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 LDHAP00338 332 aaKnown RBP14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 H2AFXP16104 143 aaPredicted RBP14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 FMR1Q06787 632 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 TMC5Q6UXY8 1006 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 ARHGAP22Q7Z5H3 698 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 IFNEQ86WN2 208 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 ARHGAP31Q2M1Z3 1444 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 USP17L3A6NCW0 530 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 USP17L4A6NCW7 530 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 F8W8V4 182 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 ZBTB24O43167 697 aaPredicted RBP14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 EFCAB14O75071 495 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 RFX1P22670 979 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 VAMP7P51809 220 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 ADRM1Q16186 407 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 TXNRD1Q16881 649 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 USP17L1Q7RTZ2 530 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 JAMLQ86YT9 394 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 ZNF786Q8N393 782 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 DYNLL2Q96FJ2 89 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 CASS4Q9NQ75 786 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 SCN3BQ9NY72 215 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 YEATS2Q9ULM3 1422 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 HNRNPRO43390 633 aaKnown RBP14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 NUP107P57740 925 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 C8orf37Q96NL8 207 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 PPCSQ9HAB8 311 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 ZNF212Q9UDV6 495 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 ZNF804BA4D1E1 1349 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 PLXNC1O60486 1568 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 RASSF9O75901 435 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 SDC4P31431 198 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 PTPN12Q05209 780 aaKnown RBP14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 PFKFB3Q16875 520 aaPredicted RBP14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 CCDC142Q17RM4 750 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 C1orf228Q6PIY5 440 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 OR6B3Q8NGW1 331 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 EPAS1Q99814 870 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 SARS2Q9NP81 518 aaKnown RBP14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 CAND2O75155 1236 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 GNA15P30679 374 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 NLRP11P59045 1033 aaKnown RBP14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 RASGRF1Q13972 1273 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 KRT72Q14CN4 511 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 SYDE2Q5VT97 1194 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 ANKRD40Q6AI12 368 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 AGPAT1Q99943 283 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 MANSC1Q9H8J5 431 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 NEU2Q9Y3R4 380 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 KIF28PB7ZC32 967 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 USP17L8P0C7I0 530 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 BMP3P12645 472 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 CDC27P30260 824 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 DMPKQ09013 629 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 NR1I3Q14994 352 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 TRADDQ15628 312 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 BARGINQ6ZT62 677 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 OMA1Q96E52 524 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 L2HGDHQ9H9P8 463 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 PCMTD2Q9NV79 361 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 KIF21AQ7Z4S6 1674 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 LOC100653049A0A140TA62 436 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 H0YIN7 160 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 KRT34O76011 436 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 FCER1AP12319 257 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 HSD17B3P37058 310 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 TBC1D10CQ8IV04 446 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 SULF1Q8IWU6 871 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 RFWD2Q8NHY2 731 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 KANSL2Q9H9L4 492 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 PIH1D3Q9NQM4 214 aaKnown RBP14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 ZNF518AQ6AHZ1 1483 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 SSU72P8A0A1W2PR75 194 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 CLDN3O15551 220 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 ATP6V1G2O95670 118 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 HOXA13P31271 388 aaPredicted RBP14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 DNAJC3Q13217 504 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 SEMA3FQ13275 785 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 RRM2BQ7LG56 351 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 NLRP10Q86W26 655 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 PCYOX1LQ8NBM8 494 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 SLC35G2Q8TBE7 412 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 IFT43Q96FT9 208 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 EGFL8Q99944 293 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 ZNF408Q9H9D4 720 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 HAO1Q9UJM8 370 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 ATP8B3O60423 1300 aa14.13□□□□□ -0.15
CCDC144A-203ENST00000360495 PSAPP07602 524 aa14.12□□□□□ -0.15
CCDC144A-203ENST00000360495 SRGNP10124 158 aa14.12□□□□□ -0.15
CCDC144A-203ENST00000360495 ACTR2P61160 394 aa14.12□□□□□ -0.15
CCDC144A-203ENST00000360495 TNFAIP1Q13829 316 aa14.12□□□□□ -0.15
CCDC144A-203ENST00000360495 MTHFD1LQ6UB35 978 aa14.12□□□□□ -0.15
CCDC144A-203ENST00000360495 RPAP1Q9BWH6 1393 aaPredicted RBP14.12□□□□□ -0.15
CCDC144A-203ENST00000360495 CDHR2Q9BYE9 1310 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms