RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 TTLL4Q14679 1199 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 TARBP2Q15633 366 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 ASTE1Q2TB18 679 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 SLC9C1Q4G0N8 1177 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 FAM160B1Q5W0V3 765 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 RNF149Q8NC42 400 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 LMO3Q8TAP4 145 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 SLC20A1Q8WUM9 679 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 GPR88Q9GZN0 384 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 MINDY3Q9H8M7 445 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 PDE11AQ9HCR9 933 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 UBE2TQ9NPD8 197 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 EHD2Q9NZN4 543 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 PACSIN2Q9UNF0 486 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 GINS2Q9Y248 185 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 JRKLQ9Y4A0 524 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 TRIP12Q14669 1992 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 LAMA3Q16787 3333 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 CTAGE9A4FU28 777 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 GOLGA6L9A6NEM1 432 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 K7ERI5 159 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 TK2O00142 265 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 LCE2BO14633 110 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 EVI5O60447 810 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 VTNP04004 478 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 SERPING1P05155 500 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 IQCF3P0C7M6 154 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 TGFB3P10600 412 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 CYP2B6P20813 491 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 FGFR4P22455 802 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 ARL2P36404 184 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 MXI1P50539 228 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 VAV2P52735 878 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 CCNA1P78396 465 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 IRX1P78414 480 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 LAMTOR4Q0VGL1 99 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 TAF1CQ15572 869 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 EPC2Q52LR7 807 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 TEX35Q5T0J7 233 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 SPOPLQ6IQ16 392 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 RASAL3Q86YV0 1011 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 KRT222Q8N1A0 295 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 PPM1KQ8N3J5 372 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 GOLGA5Q8TBA6 731 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 TAS1R2Q8TE23 839 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 SCFD2Q8WU76 684 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 ZNF516Q92618 1163 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 TATDN2Q93075 761 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 MAML3Q96JK9 1138 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 NIFKQ9BYG3 293 aaKnown RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 L2HGDHQ9H9P8 463 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 NRBP2Q9NSY0 501 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 RNF19AQ9NV58 838 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 TAS2R14Q9NYV8 317 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 MRFAP1Q9Y605 127 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 ZSWIM8A7E2V4 1837 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 F8VZ95 297 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 INO80B-WBP1J3KQ70 363 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 DKC1O60832 514 aaKnown RBP eCLIP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 MAFO75444 373 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 LGALS2P05162 132 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 INSRRP14616 1297 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 KLRC1P26715 233 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 JAM2P57087 298 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 KRT83P78385 493 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 CYP24A1Q07973 514 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 KIF5AQ12840 1032 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 STRN3Q13033 797 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 EFCAB12Q6NXP0 572 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 INTS8Q75QN2 995 aaKnown RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 PLEKHH3Q7Z736 793 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 SAPCD2Q86UD0 394 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 SLC9A9Q8IVB4 645 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 GLYCTKQ8IVS8 523 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 SUGP1Q8IWZ8 645 aaKnown RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 TMEM192Q8IY95 271 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 CCDC170Q8IYT3 715 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 PARD3BQ8TEW8 1205 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 U2AF1L4Q8WU68 220 aaKnown RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 SPIRE2Q8WWL2 714 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 PARK7Q99497 189 aaKnown RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 NAPGQ99747 312 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 NTPCRQ9BSD7 190 aaKnown RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 TCHPQ9BT92 498 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 MKNK1Q9BUB5 465 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 INO80BQ9C086 356 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 ARHGAP39Q9C0H5 1083 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 KATNBL1Q9H079 304 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 ST6GALNAC4Q9H4F1 302 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 PLCB1Q9NQ66 1216 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 SUCLA2Q9P2R7 463 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 ABT1Q9ULW3 272 aaKnown RBP5.5□□□□□ -1.53
ATXN3-202ENST00000359366 EXOC7Q9UPT5 735 aa5.5□□□□□ -1.53
ATXN3-202ENST00000359366 MGAMO43451 1857 aa5.49□□□□□ -1.53
ATXN3-202ENST00000359366 ASB14A6NK59 587 aa5.49□□□□□ -1.53
ATXN3-202ENST00000359366 DDX3XO00571 662 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATXN3-202ENST00000359366 DYNC1LI2O43237 492 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-202ENST00000359366 KRT86O43790 486 aa5.49□□□□□ -1.53
ATXN3-202ENST00000359366 FTCDO95954 541 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms