RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RBSNQ9H1K0 784 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 CPSF3Q9UKF6 684 aaKnown RBP27.67■■■□□ 2.02
SSBP3-202ENST00000357475 TTC3P53804 2025 aa27.66■■■□□ 2.02
SSBP3-202ENST00000357475 RPL13P26373 211 aaKnown RBP27.66■■■□□ 2.02
SSBP3-202ENST00000357475 GRM5P41594 1212 aa27.66■■■□□ 2.02
SSBP3-202ENST00000357475 MYBPC2Q14324 1141 aa27.66■■■□□ 2.02
SSBP3-202ENST00000357475 SNRNP35Q16560 246 aaKnown RBP27.66■■■□□ 2.02
SSBP3-202ENST00000357475 TPD52L1Q16890 204 aaPredicted RBP27.66■■■□□ 2.02
SSBP3-202ENST00000357475 ZNF365Q70YC5 407 aa27.66■■■□□ 2.02
SSBP3-202ENST00000357475 OTOP2Q7RTS6 562 aa27.66■■■□□ 2.02
SSBP3-202ENST00000357475 ECHDC2Q86YB7 292 aa27.66■■■□□ 2.02
SSBP3-202ENST00000357475 RNF19AQ9NV58 838 aa27.66■■■□□ 2.02
SSBP3-202ENST00000357475 CEP290O15078 2479 aa27.65■■■□□ 2.02
SSBP3-202ENST00000357475 IKBKBO14920 756 aa27.65■■■□□ 2.02
SSBP3-202ENST00000357475 CXCL8P10145 99 aa27.65■■■□□ 2.02
SSBP3-202ENST00000357475 FAM189BP81408 668 aa27.65■■■□□ 2.02
SSBP3-202ENST00000357475 IKBKEQ14164 716 aa27.65■■■□□ 2.02
SSBP3-202ENST00000357475 ENOX2Q16206 610 aaKnown RBP27.65■■■□□ 2.02
SSBP3-202ENST00000357475 SLC24A5Q71RS6 500 aa27.65■■■□□ 2.02
SSBP3-202ENST00000357475 RNF169Q8NCN4 708 aa27.65■■■□□ 2.02
SSBP3-202ENST00000357475 CEP63Q96MT8 703 aa27.65■■■□□ 2.02
SSBP3-202ENST00000357475 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.65■■■□□ 2.022e-7■□□□□ 10
SSBP3-202ENST00000357475 ANP32EQ9BTT0 268 aa27.65■■■□□ 2.02
SSBP3-202ENST00000357475 NR2E3Q9Y5X4 410 aa27.65■■■□□ 2.02
SSBP3-202ENST00000357475 RALGAPA2Q2PPJ7 1873 aa27.64■■■□□ 2.02
SSBP3-202ENST00000357475 PFKMP08237 780 aa27.64■■■□□ 2.02
SSBP3-202ENST00000357475 ZNF598Q86UK7 904 aaKnown RBP27.64■■■□□ 2.02
SSBP3-202ENST00000357475 PLEKHO2Q8TD55 490 aa27.64■■■□□ 2.02
SSBP3-202ENST00000357475 FAM84AQ96KN4 292 aa27.64■■■□□ 2.02
SSBP3-202ENST00000357475 LBHD1Q9BQE6 289 aaPredicted RBP27.64■■■□□ 2.02
SSBP3-202ENST00000357475 KLK14Q9P0G3 267 aa27.64■■■□□ 2.02
SSBP3-202ENST00000357475 RECQL4O94761 1208 aa27.63■■■□□ 2.01
SSBP3-202ENST00000357475 CAVIN2O95810 425 aa27.63■■■□□ 2.01
SSBP3-202ENST00000357475 RGS19P49795 217 aa27.63■■■□□ 2.01
SSBP3-202ENST00000357475 TMEM240Q5SV17 173 aa27.63■■■□□ 2.01
SSBP3-202ENST00000357475 AGMOQ6ZNB7 445 aa27.63■■■□□ 2.01
SSBP3-202ENST00000357475 TMCO2Q7Z6W1 182 aaPredicted RBP27.63■■■□□ 2.01
SSBP3-202ENST00000357475 FILIP1Q7Z7B0 1213 aa27.63■■■□□ 2.01
SSBP3-202ENST00000357475 MRPL10Q7Z7H8 261 aaKnown RBP27.63■■■□□ 2.01
SSBP3-202ENST00000357475 FAM186BQ8IYM0 893 aa27.63■■■□□ 2.01
SSBP3-202ENST00000357475 BORCS6Q96GS4 357 aa27.63■■■□□ 2.01
SSBP3-202ENST00000357475 LAMA2P24043 3122 aaKnown RBP27.63■■■□□ 2.01
SSBP3-202ENST00000357475 PDCD11Q14690 1871 aaKnown RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 TULP1O00294 542 aaPredicted RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 KIAA0391O15091 583 aaKnown RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 ZNF623O75123 536 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 MAGEA10P43363 369 aaPredicted RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 DEFB103AP81534 67 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 SLC10A6Q3KNW5 377 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 CDKAL1Q5VV42 579 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 APBB1IPQ7Z5R6 666 aaPredicted RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 ACAP3Q96P50 834 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 THAP9Q9H5L6 903 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 C1orf112Q9NSG2 853 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 RBAKQ9NYW8 714 aaPredicted RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 FRMD4BQ9Y2L6 1034 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 BECN2A8MW95 431 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 LDHAP00338 332 aaKnown RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 CLTAP09496 248 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 PSMC2P35998 433 aaKnown RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 RAB27AP51159 221 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 AFF1P51825 1210 aaKnown RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 CRIPAKQ8N1N5 446 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 CNOT6LQ96LI5 555 aaKnown RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 CCDC94Q9BW85 323 aaPredicted RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 CXXC1Q9P0U4 656 aaPredicted RBP27.62■■■□□ 2.01
SSBP3-202ENST00000357475 PARP2Q9UGN5 583 aa27.62■■■□□ 2.01
SSBP3-202ENST00000357475 ABHD14A-ACY1A0A1B0GW23 586 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 ZNF233A6NK53 670 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 FGBP02675 491 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 ITGA4P13612 1032 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 ATP1A3P13637 1013 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 ZNF18P17022 549 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 WDR5P61964 334 aaKnown RBP27.61■■■□□ 2.01
SSBP3-202ENST00000357475 DLG4P78352 724 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 SPAG1Q07617 926 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 CYP24A1Q07973 514 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 CREBRFQ8IUR6 639 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 TMEM130Q8N3G9 435 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 FAM212AQ96EL1 285 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 PDE11AQ9HCR9 933 aa27.61■■■□□ 2.01
SSBP3-202ENST00000357475 SMTNL1A8MU46 457 aa27.6■■■□□ 2.01
SSBP3-202ENST00000357475 H0YGN5 161 aa27.6■■■□□ 2.01
SSBP3-202ENST00000357475 SLC16A3O15427 465 aaKnown RBP27.6■■■□□ 2.01
SSBP3-202ENST00000357475 FGFR1P11362 822 aa27.6■■■□□ 2.01
SSBP3-202ENST00000357475 BRSK2Q8IWQ3 736 aa27.6■■■□□ 2.01
SSBP3-202ENST00000357475 MFSD14AQ96MC6 490 aa27.6■■■□□ 2.01
SSBP3-202ENST00000357475 ZFP42Q96MM3 310 aa27.6■■■□□ 2.01
SSBP3-202ENST00000357475 POP1Q99575 1024 aaKnown RBP27.6■■■□□ 2.01
SSBP3-202ENST00000357475 MKNK1Q9BUB5 465 aa27.6■■■□□ 2.01
SSBP3-202ENST00000357475 RPF1Q9H9Y2 349 aaKnown RBP27.6■■■□□ 2.01
SSBP3-202ENST00000357475 KIAA1586Q9HCI6 787 aa27.6■■■□□ 2.01
SSBP3-202ENST00000357475 LACTBL1A8MY62 500 aa27.59■■■□□ 2.01
SSBP3-202ENST00000357475 EPB41P11171 864 aaKnown RBP27.59■■■□□ 2.01
SSBP3-202ENST00000357475 GATMP50440 423 aa27.59■■■□□ 2.01
SSBP3-202ENST00000357475 CCDC40Q4G0X9 1142 aa27.59■■■□□ 2.01
SSBP3-202ENST00000357475 CCDC127Q96BQ5 260 aa27.59■■■□□ 2.01
SSBP3-202ENST00000357475 SNX27Q96L92 541 aa27.59■■■□□ 2.01
SSBP3-202ENST00000357475 PTPRJQ12913 1337 aa27.59■■■□□ 2.01
SSBP3-202ENST00000357475 RANBP2P49792 3224 aaKnown RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms