RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 GFPT1Q06210 699 aaPredicted RBP13.55□□□□□ -0.24
SMC4-202ENST00000357388 GRAPQ13588 217 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 DDIASQ8IXT1 998 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 STAG2Q8N3U4 1231 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 GRAPLQ8TC17 118 aaPredicted RBP13.55□□□□□ -0.24
SMC4-202ENST00000357388 RHBDL2Q9NX52 303 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.55□□□□□ -0.24
SMC4-202ENST00000357388 SUGT1Q9Y2Z0 365 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 MLH3Q9UHC1 1453 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.54□□□□□ -0.24
SMC4-202ENST00000357388 FAM47DPA6NHR8 397 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 PSMD3O43242 534 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 ITIH2P19823 946 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 LAMB3Q13751 1172 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 EFHBQ8N7U6 833 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 ST13P5Q8NFI4 369 aaPredicted RBP13.54□□□□□ -0.24
SMC4-202ENST00000357388 ATL2Q8NHH9 583 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 ARL8AQ96BM9 186 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 CYFIP2Q96F07 1278 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 NOD2Q9HC29 1040 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 NGRNQ9NPE2 291 aaKnown RBP13.54□□□□□ -0.24
SMC4-202ENST00000357388 PSMC3IPQ9P2W1 217 aaPredicted RBP13.54□□□□□ -0.24
SMC4-202ENST00000357388 FAM32AQ9Y421 112 aaKnown RBP13.54□□□□□ -0.24
SMC4-202ENST00000357388 ZHX2Q9Y6X8 837 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 NFIBO00712 420 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 ZNF197O14709 1029 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 DLGAP3O95886 979 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 USP17L8P0C7I0 530 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 SLC16A2P36021 539 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 PRAMEP78395 509 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 HIF1AQ16665 826 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 RFWD2Q8NHY2 731 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 DCAF4Q8WV16 495 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 RMDN1Q96DB5 314 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 UVRAGQ9P2Y5 699 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 MKL2Q9ULH7 1088 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 SNX12Q9UMY4 172 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 PCDHB6Q9Y5E3 794 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 EIF2S1P05198 315 aaKnown RBP13.54□□□□□ -0.24
SMC4-202ENST00000357388 TCF3P15923 654 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 LSP1P33241 339 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 SOX6P35712 828 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 ARID5BQ14865 1188 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 LLGL1Q15334 1064 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 RBBP7Q16576 425 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 KYNUQ16719 465 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 BEST2Q8NFU1 509 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 NSL1Q96IY1 281 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 CNPY3Q9BT09 278 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 TRIM62Q9BVG3 475 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 ZNF341Q9BYN7 854 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 POU5F1BQ06416 359 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 ITIH4Q14624 930 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 CENPPQ6IPU0 288 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 IL17REQ8NFR9 667 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 KLHL31Q9H511 634 aa13.54□□□□□ -0.24
SMC4-202ENST00000357388 RCAN1P53805 252 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 EFL1Q7Z2Z2 1120 aaKnown RBP13.53□□□□□ -0.24
SMC4-202ENST00000357388 MICU2Q8IYU8 434 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 INPP5FQ9Y2H2 1132 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 WDR19Q8NEZ3 1342 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 NBPF26B4DH59 902 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 E5RI56 91 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 FAM83BQ5T0W9 1011 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 NBPF15Q8N660 670 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 TSPAN17Q96FV3 270 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 COQ7Q99807 217 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 CASS4Q9NQ75 786 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
SMC4-202ENST00000357388 KCNQ4P56696 695 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 KRT17Q04695 432 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 UBE3AQ05086 875 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 FASTKD1Q53R41 847 aaKnown RBP13.53□□□□□ -0.24
SMC4-202ENST00000357388 SZRD1Q7Z422 152 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 SIKE1Q9BRV8 207 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 HEMGNQ9BXL5 484 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 SLC13A1Q9BZW2 595 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 CARD9Q9H257 536 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 UBAP1Q9NZ09 502 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 PRG3Q9Y2Y8 225 aaPredicted RBP13.53□□□□□ -0.24
SMC4-202ENST00000357388 NUP153P49790 1475 aaKnown RBP13.53□□□□□ -0.24
SMC4-202ENST00000357388 ADGRA3Q8IWK6 1321 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 PHF2O75151 1096 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 MYCP01106 439 aaPredicted RBP13.53□□□□□ -0.24
SMC4-202ENST00000357388 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
SMC4-202ENST00000357388 MAPK6Q16659 721 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 CCDC142Q17RM4 750 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 CCNI2Q6ZMN8 369 aaPredicted RBP13.53□□□□□ -0.24
SMC4-202ENST00000357388 CLEC17AQ6ZS10 378 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 FLCNQ8NFG4 579 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 ERP27Q96DN0 273 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 STAP1Q9ULZ2 295 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 SAC3D1A6NKF1 404 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 TRIM66O15016 1216 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 UGP2Q16851 508 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms