RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MRPL40Q9NQ50 206 aaKnown RBP18.19■□□□□ 0.5
COL27A1-201ENST00000356083 TBC1D4O60343 1298 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 FAM162AQ96A26 154 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 FAM47E-STBD1D6RA91 191 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 RGS5O15539 181 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 SRP68Q9UHB9 627 aaKnown RBP18.19■□□□□ 0.5
COL27A1-201ENST00000356083 ABCC12Q96J65 1359 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 PALMO75781 387 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 HSD17B4P51659 736 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 GPSM2P81274 684 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 APOA5Q6Q788 366 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 SHCBP1Q8NEM2 672 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 ANKRD65E5RJM6 399 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 SERPINB4P48594 390 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 CDH6P55285 790 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 CCDC15Q0P6D6 951 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 ELMO2Q96JJ3 720 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 RNPEPQ9H4A4 650 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
COL27A1-201ENST00000356083 A0A087X0T9 212 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 SPTLC1O15269 473 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 ZNF211Q13398 564 aaPredicted RBP18.18■□□□□ 0.5
COL27A1-201ENST00000356083 USP39Q53GS9 565 aaKnown RBP18.18■□□□□ 0.5
COL27A1-201ENST00000356083 FAM129AQ9BZQ8 928 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 CNOT10Q9H9A5 744 aaKnown RBP18.18■□□□□ 0.5
COL27A1-201ENST00000356083 CARMIL3Q8ND23 1372 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 LUZP2Q86TE4 346 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 STAG2Q8N3U4 1231 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 SCFD1Q8WVM8 642 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 EPN3Q9H201 632 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 GABBR1Q9UBS5 961 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 CYP7B1O75881 506 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 CDK8P49336 464 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 PLCL1Q15111 1095 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 MIER2Q8N344 545 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 MRPL4Q9BYD3 311 aaKnown RBP18.18■□□□□ 0.5
COL27A1-201ENST00000356083 SNX24Q9Y343 169 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 GSTM1P09488 218 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 ITGAXP20702 1163 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 SPP2Q13103 211 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 CUL3Q13618 768 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 IRAK1BP1Q5VVH5 260 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 ANKMY2Q8IV38 441 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 C6orf222P0C671 652 aaPredicted RBP18.18■□□□□ 0.5
COL27A1-201ENST00000356083 TMEM35BQ8NCS4 154 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 MAGED4Q96JG8 741 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 CDC23Q9UJX2 597 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 PCDHA6Q9UN73 950 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 PLAAQ9Y263 795 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 PCDHA8Q9Y5H6 950 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 GCFC2P16383 781 aaKnown RBP18.18■□□□□ 0.5
COL27A1-201ENST00000356083 RIN3Q8TB24 985 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 ENTPD7Q9NQZ7 604 aa18.18■□□□□ 0.5
COL27A1-201ENST00000356083 PNMA6FA0A0J9YX94 578 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 ASAP2O43150 1006 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 ENO2P09104 434 aaPredicted RBP18.17■□□□□ 0.5
COL27A1-201ENST00000356083 ENO3P13929 434 aaPredicted RBP18.17■□□□□ 0.5
COL27A1-201ENST00000356083 PSMA3P25788 255 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 FEN1P39748 380 aaKnown RBP18.17■□□□□ 0.5
COL27A1-201ENST00000356083 SULT1E1P49888 294 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 SLC25A41Q8N5S1 370 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 NFKBIZQ9BYH8 718 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 SYCP2Q9BX26 1530 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 TSC22D2O75157 780 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 ZNF157P51786 506 aaPredicted RBP18.17■□□□□ 0.5
COL27A1-201ENST00000356083 FAM160B2Q86V87 743 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 CLMNQ96JQ2 1002 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 CUEDC2Q9H467 287 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 SERPINB10P48595 397 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 CDK17Q00537 523 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 MKRN4PQ13434 485 aaPredicted RBP18.17■□□□□ 0.5
COL27A1-201ENST00000356083 C11orf70Q9BRQ4 267 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 ECT2Q9H8V3 914 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 TTLL13PA6NNM8 815 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 GYS1P13807 737 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 TP53BP2Q13625 1128 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 TCEA2Q15560 299 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 CCDC81Q6ZN84 652 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 FAM167BQ9BTA0 163 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 ZRANB3Q5FWF4 1079 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 ZNF438Q7Z4V0 828 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 FOXP1Q9H334 677 aaPredicted RBP18.17■□□□□ 0.5
COL27A1-201ENST00000356083 AKAP10O43572 662 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 APPL1Q9UKG1 709 aa18.17■□□□□ 0.5
COL27A1-201ENST00000356083 ACADMP11310 421 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
COL27A1-201ENST00000356083 YWHAZP63104 245 aaKnown RBP18.16■□□□□ 0.5
COL27A1-201ENST00000356083 TMEM154Q6P9G4 183 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 GAS2L3Q86XJ1 694 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 SLC24A3Q9HC58 644 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 RRP15Q9Y3B9 282 aaKnown RBP18.16■□□□□ 0.5
COL27A1-201ENST00000356083 KIF1BO60333 1816 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 RPS7P62081 194 aaKnown RBP18.16■□□□□ 0.5
COL27A1-201ENST00000356083 LRRC14Q15048 493 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 MAGEF1Q9HAY2 307 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 GUCY1A2P33402 732 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 CARD14Q9BXL6 1004 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 DHX36Q9H2U1 1008 aaKnown RBP18.16■□□□□ 0.5
COL27A1-201ENST00000356083 ERVK-10P10266 1014 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms