RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 HSD17B4P51659 736 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 COPB1P53618 953 aaKnown RBP9.04□□□□□ -0.96
CD44-205ENST00000352818 SPEM2Q0P670 501 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 KCNJ12Q14500 433 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 MCM6Q14566 821 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 PWP2Q15269 919 aaKnown RBP9.04□□□□□ -0.96
CD44-205ENST00000352818 CCDC6Q16204 474 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 USH1GQ495M9 461 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 PAN2Q504Q3 1202 aaKnown RBP9.04□□□□□ -0.96
CD44-205ENST00000352818 E4F1Q66K89 784 aaPredicted RBP9.04□□□□□ -0.96
CD44-205ENST00000352818 CENPPQ6IPU0 288 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 RTN4RL1Q86UN2 441 aaPredicted RBP9.04□□□□□ -0.96
CD44-205ENST00000352818 IRF2BP1Q8IU81 584 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 C12orf76Q8N812 135 aaPredicted RBP9.04□□□□□ -0.96
CD44-205ENST00000352818 TC2NQ8N9U0 490 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 MYRIPQ8NFW9 859 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 APBB2Q92870 758 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 PANX2Q96RD6 677 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 PLIN2Q99541 437 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 NAA15Q9BXJ9 866 aaKnown RBP9.04□□□□□ -0.96
CD44-205ENST00000352818 CYP26B1Q9NR63 512 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 WNT16Q9UBV4 365 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 CA14Q9ULX7 337 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.04□□□□□ -0.96
CD44-205ENST00000352818 FRMPD4Q14CM0 1322 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 TTC3P53804 2025 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 PLXNA4Q9HCM2 1894 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 IGLV3-22A0A075B6J6 115 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 LGALS16A8MUM7 142 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 AKR1B15C9JRZ8 316 aaPredicted RBP9.03□□□□□ -0.96
CD44-205ENST00000352818 STK25O00506 426 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 TREHO43280 583 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 MARCH6O60337 910 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 CHRNA1P02708 482 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 RPA1P27694 616 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 CCT6AP40227 531 aaKnown RBP9.03□□□□□ -0.96
CD44-205ENST00000352818 SETQ01105 290 aaPredicted RBP9.03□□□□□ -0.96
CD44-205ENST00000352818 LRRC63Q05C16 580 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 ITIH3Q06033 890 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 STK4Q13043 487 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 DGKDQ16760 1214 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 FAM26DQ5JW98 314 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 PLPP4Q5VZY2 271 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 PRR23BQ6ZRT6 265 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 NIPA1Q7RTP0 329 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 KCNK18Q7Z418 384 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 CNGA4Q8IV77 575 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 KIAA0895Q8NCT3 520 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 RSAD2Q8WXG1 361 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 CLEC4DQ8WXI8 215 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 DDX12PQ92771 950 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 GATA6Q92908 595 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 IQCDQ96DY2 449 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 DUSP9Q99956 384 aaKnown RBP9.03□□□□□ -0.96
CD44-205ENST00000352818 POLR3CQ9BUI4 534 aaPredicted RBP9.03□□□□□ -0.96
CD44-205ENST00000352818 FOXQ1Q9C009 403 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 MAP3K20Q9NYL2 800 aaKnown RBP9.03□□□□□ -0.96
CD44-205ENST00000352818 VAV3Q9UKW4 847 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 SIT1Q9Y3P8 196 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 PAXBP1Q9Y5B6 917 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 PCDHGA2Q9Y5H1 932 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 HCFC2Q9Y5Z7 792 aa9.03□□□□□ -0.96
CD44-205ENST00000352818 KALRNO60229 2985 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 COL4A3Q01955 1670 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 UQCRHLA0A096LP55 91 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 TRIM49BA6NDI0 452 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 GOLGA6L9A6NEM1 432 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 FAM86B1E9PN63 330 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 DYNC1I1O14576 645 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 N4BP3O15049 544 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 MSH4O15457 936 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 TEX33O43247 280 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 N4BP1O75113 896 aaKnown RBP9.02□□□□□ -0.97
CD44-205ENST00000352818 MFAP3LO75121 409 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 MED24O75448 989 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 FGF18O76093 207 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 FGFR1OPO95684 399 aaKnown RBP9.02□□□□□ -0.97
CD44-205ENST00000352818 GH1P01241 217 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 UQCRHP07919 91 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 TPM1P09493 284 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 FAM86B2P0C5J1 330 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 TNNT1P13805 278 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 SPINK2P20155 84 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 MTHFRP42898 656 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 PMS1P54277 932 aaKnown RBP9.02□□□□□ -0.97
CD44-205ENST00000352818 UBE3AQ05086 875 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 PTPN14Q15678 1187 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 ECM1Q16610 540 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 PRR16Q569H4 304 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 HSP90AA4PQ58FG1 418 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 KIAA1841Q6NSI8 718 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 PHLDB3Q6NSJ2 640 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 PPFIBP1Q86W92 1011 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 MCF2L2Q86YR7 1114 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 ZNF507Q8TCN5 953 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 DNAJC19Q96DA6 116 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 PPP1R13BQ96KQ4 1090 aa9.02□□□□□ -0.97
CD44-205ENST00000352818 C16orf45Q96MC5 204 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms