RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 IFT43Q96FT9 208 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 AKAP7Q9P0M2 348 aaPredicted RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 RNF14Q9UBS8 474 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 AMACRQ9UHK6 382 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 POC1B-GALNT4F8VUJ3 575 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 RNASEH1O60930 286 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 DDX5P17844 614 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 THPOP40225 353 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 FBXW4P57775 412 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 RBBP5Q15291 538 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 CES5AQ6NT32 575 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 SCARA5Q6ZMJ2 495 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 SDCCAG8Q86SQ7 713 aaPredicted RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 GLYCTKQ8IVS8 523 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 POLR3FQ9H1D9 316 aaPredicted RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 RGL1Q9NZL6 768 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 SUCLA2Q9P2R7 463 aaPredicted RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 CPA4Q9UI42 421 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 ACSL3O95573 720 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 PAMP19021 973 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 RFC5P40937 340 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 OR1G1P47890 313 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 MDM2Q00987 491 aaPredicted RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 ELAVL2Q12926 359 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 CDKAL1Q5VV42 579 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 RGMBQ6NW40 437 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 TTC30BQ8N4P2 665 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 EGFRP00533 1210 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 GRIK1P39086 918 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 SARSP49591 514 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 MAGOHP61326 146 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 BAATQ14032 418 aaPredicted RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 ARHGEF2Q92974 986 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 OPTNQ96CV9 577 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 EMILIN2Q9BXX0 1053 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 THG1LQ9NWX6 298 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 CAPN6Q9Y6Q1 641 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 GOLGA8QA0A0J9YX86 632 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 GOLGA8OA6NCC3 632 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 TMEM247A6NEH6 219 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 GOLGA8NF8WBI6 632 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 STRNO43815 780 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 SLC37A4O43826 429 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 CIB2O75838 187 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 IFNA8P32881 189 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 PTK2BQ14289 1009 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 DDX42Q86XP3 938 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLCN6-202ENST00000346436 TEX2Q8IWB9 1127 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 DYDC2Q96IM9 177 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 NUDCD1Q96RS6 583 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 C7orf25Q9BPX7 421 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 FLT1P17948 1338 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 IPO5O00410 1097 aaKnown RBP11.56□□□□□ -0.56
CLCN6-202ENST00000346436 GCLMP48507 274 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 CARSP49589 748 aaKnown RBP11.56□□□□□ -0.56
CLCN6-202ENST00000346436 SP3Q02447 781 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 TBX2Q13207 712 aaPredicted RBP11.56□□□□□ -0.56
CLCN6-202ENST00000346436 ZNF512Q96ME7 567 aaPredicted RBP11.56□□□□□ -0.56
CLCN6-202ENST00000346436 HOMER3Q9NSC5 361 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 BCAP29Q9UHQ4 241 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 SCINQ9Y6U3 715 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 PASKQ96RG2 1323 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 ATF2P15336 505 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 TBXAS1P24557 533 aaPredicted RBP11.56□□□□□ -0.56
CLCN6-202ENST00000346436 PCSK1P29120 753 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 KNOP1Q1ED39 458 aaKnown RBP11.56□□□□□ -0.56
CLCN6-202ENST00000346436 SGO2Q562F6 1265 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 FBXO33Q7Z6M2 555 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 ERICH1Q86X53 443 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 CCDC197Q8NCU1 140 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 SH3KBP1Q96B97 665 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 TRIM45Q9H8W5 580 aaPredicted RBP11.56□□□□□ -0.56
CLCN6-202ENST00000346436 KDM4FA0A1W2PPD8 638 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 GYS1P13807 737 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 FBXL16Q8N461 479 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 TSSK1BQ9BXA7 367 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 SEL1LQ9UBV2 794 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 ZNF148Q9UQR1 794 aa11.56□□□□□ -0.56
CLCN6-202ENST00000346436 A8MXQ7 604 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 WNT7AO00755 349 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 SLC9A1P19634 815 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 NMT1P30419 496 aaKnown RBP11.55□□□□□ -0.56
CLCN6-202ENST00000346436 PRAMEF18Q5VWM3 479 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 PROM2Q8N271 834 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 ZMYND12Q9H0C1 365 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 TARSL2A2RTX5 802 aaKnown RBP11.55□□□□□ -0.56
CLCN6-202ENST00000346436 PCK1P35558 622 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 PLD1Q13393 1074 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 TMTC4Q5T4D3 741 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 CDC42EP5Q6NZY7 148 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 MRPS31Q92665 395 aaKnown RBP11.55□□□□□ -0.56
CLCN6-202ENST00000346436 SLITRK1Q96PX8 696 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 CENPKQ9BS16 269 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 HAUS8Q9BT25 410 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 TMCC1O94876 653 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 DGKZQ13574 1117 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 SNCBQ16143 134 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 KCTD19Q17RG1 926 aaPredicted RBP11.55□□□□□ -0.56
CLCN6-202ENST00000346436 SBK1Q52WX2 424 aa11.55□□□□□ -0.56
CLCN6-202ENST00000346436 TRIM68Q6AZZ1 485 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms