RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 TNNI1P19237 187 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 TNFAIP3P21580 790 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 MFAP3P55082 362 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 SAPCD2Q86UD0 394 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 NLRP4Q96MN2 994 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 CLDN3O15551 220 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 ASAP2O43150 1006 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 TOM1L1O75674 476 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 C4BPAP04003 597 aaKnown RBP21.6■■□□□ 1.05
RTN1-202ENST00000342503 MAP2K5Q13163 448 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 SEZ6Q53EL9 994 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 ZBTB33Q86T24 672 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 MSL3Q8N5Y2 521 aaKnown RBP21.6■■□□□ 1.05
RTN1-202ENST00000342503 ELMO3Q96BJ8 720 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 AGPAT1Q99943 283 aa21.6■■□□□ 1.05
RTN1-202ENST00000342503 PTPRJQ12913 1337 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 MMP3P08254 477 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 H2AFZP0C0S5 128 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 USP8P40818 1118 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 PRPF4BQ13523 1007 aaKnown RBP21.59■■□□□ 1.05
RTN1-202ENST00000342503 H2AFVQ71UI9 128 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 FAM71AQ8IYT1 594 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 PDCL2Q8N4E4 241 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 SLC20A1Q8WUM9 679 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 TATDN2Q93075 761 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 CGRRF1Q99675 332 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 SNX12Q9UMY4 172 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 COL1A2P08123 1366 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 CNTNAP2Q9UHC6 1331 aa21.59■■□□□ 1.05
RTN1-202ENST00000342503 MAGEB2O15479 319 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 ADCY6O43306 1168 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 PALMO75781 387 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 SLC10A3P09131 477 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 PTENP60484 403 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 ZACNQ401N2 412 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 PRAMEF19Q5SWL8 479 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 TDRD10Q5VZ19 366 aaKnown RBP21.58■■□□□ 1.05
RTN1-202ENST00000342503 IFNL1Q8IU54 200 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 LINC01465Q8N7H1 131 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 SHC3Q92529 594 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 TCHPQ9BT92 498 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 PI4K2AQ9BTU6 479 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 FZD8Q9H461 694 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 INTUQ9ULD6 942 aa21.58■■□□□ 1.05
RTN1-202ENST00000342503 CTAGE15A4D2H0 777 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 H3BRB1 525 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 ABLIM1O14639 778 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 NCK2O43639 380 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 FAM189A1O60320 539 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 ZC3H11AO75152 810 aaKnown RBP eCLIP21.58■■□□□ 1.04
RTN1-202ENST00000342503 CTAGE8P0CG41 777 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 HOXD8P13378 290 aaPredicted RBP21.58■■□□□ 1.04
RTN1-202ENST00000342503 TNFSF9P41273 254 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 C17orf99Q6UX52 265 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 CTAGE6Q86UF2 777 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 CTAGE4Q8IX94 777 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 RABGGTAQ92696 567 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 CAPZA3Q96KX2 299 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 EPC1Q9H2F5 836 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 TUT1Q9H6E5 874 aaKnown RBP21.58■■□□□ 1.04
RTN1-202ENST00000342503 SEPT11Q9NVA2 429 aaKnown RBP21.58■■□□□ 1.04
RTN1-202ENST00000342503 FLRT1Q9NZU1 646 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 PCDHGC5Q9Y5F6 944 aa21.58■■□□□ 1.04
RTN1-202ENST00000342503 TMCO5BA8MYB1 307 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 INO80B-WBP1J3KQ70 363 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 ACKR2O00590 384 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 ZNF185O15231 689 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 SGPL1O95470 568 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 HLA-DRAP01903 254 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 GALCP54803 685 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 TNFAIP2Q03169 654 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 MBTD1Q05BQ5 628 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 MCL1Q07820 350 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 TSHZ1Q6ZSZ6 1077 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 BRSK2Q8IWQ3 736 aa21.57■■□□□ 1.04
RTN1-202ENST00000342503 INO80BQ9C086 356 aaPredicted RBP21.57■■□□□ 1.04
RTN1-202ENST00000342503 KAT6AQ92794 2004 aa21.56■■□□□ 1.04
RTN1-202ENST00000342503 CYP26A1O43174 497 aa21.56■■□□□ 1.04
RTN1-202ENST00000342503 VNN1O95497 513 aa21.56■■□□□ 1.04
RTN1-202ENST00000342503 PRLRP16471 622 aa21.56■■□□□ 1.04
RTN1-202ENST00000342503 PIK3CAP42336 1068 aa21.56■■□□□ 1.04
RTN1-202ENST00000342503 BIRC3Q13489 604 aa21.56■■□□□ 1.04
RTN1-202ENST00000342503 FBXO38Q6PIJ6 1188 aa21.56■■□□□ 1.04
RTN1-202ENST00000342503 MTHFD1LQ6UB35 978 aa21.56■■□□□ 1.04
RTN1-202ENST00000342503 MTERF4Q7Z6M4 381 aaKnown RBP21.56■■□□□ 1.04
RTN1-202ENST00000342503 RPUSD2Q8IZ73 545 aaKnown RBP21.56■■□□□ 1.04
RTN1-202ENST00000342503 MMS19Q96T76 1030 aa21.56■■□□□ 1.04
RTN1-202ENST00000342503 MINDY3Q9H8M7 445 aa21.56■■□□□ 1.04
RTN1-202ENST00000342503 GRID2IPA4D2P6 1211 aa21.55■■□□□ 1.04
RTN1-202ENST00000342503 OGTO15294 1046 aa21.55■■□□□ 1.04
RTN1-202ENST00000342503 B4GALT5O43286 388 aa21.55■■□□□ 1.04
RTN1-202ENST00000342503 PROZP22891 400 aa21.55■■□□□ 1.04
RTN1-202ENST00000342503 NOP2P46087 812 aaKnown RBP21.55■■□□□ 1.04
RTN1-202ENST00000342503 DGKDQ16760 1214 aa21.55■■□□□ 1.04
RTN1-202ENST00000342503 ATF7IP2Q5U623 682 aa21.55■■□□□ 1.04
RTN1-202ENST00000342503 NFRKBQ6P4R8 1299 aa21.55■■□□□ 1.04
RTN1-202ENST00000342503 MPZL3Q6UWV2 235 aa21.55■■□□□ 1.04
RTN1-202ENST00000342503 NOP9Q86U38 636 aaKnown RBP21.55■■□□□ 1.04
RTN1-202ENST00000342503 PALB2Q86YC2 1186 aa21.55■■□□□ 1.04
RTN1-202ENST00000342503 GPR161Q8N6U8 529 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms